RetrogeneDB - Parental gene ENSGGOG00000000971 details

                            
>ENSGGOG00000000971
ATGCCCAAGAGAAAGGCTGAAGGGGATGCTAAGGGAGATAAAGCCAAGGTGAAGGACGAACCACAGAGAAGATCCGCGAG

GTTGTCTGCTAAACCTGCTCCTCCAAAGCCAGAGCCCAAGCCTAAAAAGGCCCCTGCAAAGAAGGGAGAGAAGGTACCCA

AAGGGAAAAAGGGAAAAGCTGATGCTGGCAAGGAGGGGAATAACCCTGCAGAAAATGGAGATGCCAAAACAGACCAGGCA

CAGAAAGCTGAAGGTGCTGGAGATGCCAAGTGA

Library	Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex	22 .35 RPM
SRP007412_cerebellum	23 .13 RPM
SRP007412_heart	11 .32 RPM
SRP007412_kidney	33 .61 RPM
SRP007412_liver	26 .17 RPM
SRP007412_testis	46 .31 RPM

Species	Parental gene accession	Homology type	Retrogenes number
Dipodomys ordii	ENSDORG00000001787	possible_ortholog	3 retrogenes	retro_dord_10, retro_dord_401, retro_dord_511,
Felis catus	ENSFCAG00000012812	possible_ortholog	3 retrogenes	retro_fcat_1842, retro_fcat_4, retro_fcat_530,
Homo sapiens	ENSG00000198830	possible_ortholog	51 retrogenes	retro_hsap_100, retro_hsap_114, retro_hsap_1208, retro_hsap_1368, retro_hsap_1395, retro_hsap_1427, retro_hsap_1471, retro_hsap_1492, retro_hsap_1512, retro_hsap_1517, retro_hsap_1518, retro_hsap_1586, retro_hsap_1670, retro_hsap_1684, retro_hsap_1787, retro_hsap_1834, retro_hsap_1931, retro_hsap_1934, retro_hsap_2082, retro_hsap_2116, retro_hsap_2296, retro_hsap_2309, retro_hsap_233, retro_hsap_2564, retro_hsap_2592, retro_hsap_2728, retro_hsap_273, retro_hsap_2755, retro_hsap_2779, retro_hsap_2849, retro_hsap_2914, retro_hsap_318, retro_hsap_3189, retro_hsap_3339, retro_hsap_3372, retro_hsap_3412, retro_hsap_3515, retro_hsap_3616, retro_hsap_3755, retro_hsap_3896, retro_hsap_4124, retro_hsap_4138, retro_hsap_4297, retro_hsap_4791, retro_hsap_4914, retro_hsap_601, retro_hsap_688, retro_hsap_689, retro_hsap_718, retro_hsap_793, retro_hsap_849,
Macropus eugenii	ENSMEUG00000010966	possible_ortholog	8 retrogenes	retro_meug_1178, retro_meug_126, retro_meug_1859, retro_meug_1910, retro_meug_1997, retro_meug_248, retro_meug_369, retro_meug_76,
Mus musculus	ENSMUSG00000003038	possible_ortholog	2 retrogenes	retro_mmus_202, retro_mmus_2582,
Otolemur garnettii	ENSOGAG00000032571	possible_ortholog	14 retrogenes	retro_ogar_1438, retro_ogar_1445, retro_ogar_1603, retro_ogar_1668, retro_ogar_1687, retro_ogar_1998, retro_ogar_2097, retro_ogar_2210, retro_ogar_2231, retro_ogar_2424, retro_ogar_287, retro_ogar_2989, retro_ogar_3411, retro_ogar_52,
Pongo abelii	ENSPPYG00000001682	possible_ortholog	16 retrogenes	retro_pabe_1182, retro_pabe_1511, retro_pabe_1977, retro_pabe_1989, retro_pabe_206, retro_pabe_2263, retro_pabe_23, retro_pabe_2601, retro_pabe_3, retro_pabe_3480, retro_pabe_366, retro_pabe_396, retro_pabe_533, retro_pabe_535, retro_pabe_589, retro_pabe_696,
Pan troglodytes	ENSPTRG00000000386	possible_ortholog	54 retrogenes	retro_ptro_1011, retro_ptro_1024, retro_ptro_1026, retro_ptro_1027, retro_ptro_1040, retro_ptro_1053, retro_ptro_1067, retro_ptro_1094, retro_ptro_1197, retro_ptro_1235, retro_ptro_128, retro_ptro_1291, retro_ptro_1292, retro_ptro_1495, retro_ptro_1516, retro_ptro_1532, retro_ptro_1549, retro_ptro_1625, retro_ptro_1633, retro_ptro_1837, retro_ptro_1844, retro_ptro_1863, retro_ptro_1880, retro_ptro_1929, retro_ptro_1970, retro_ptro_203, retro_ptro_2255, retro_ptro_229, retro_ptro_2292, retro_ptro_2317, retro_ptro_2387, retro_ptro_2445, retro_ptro_2461, retro_ptro_2549, retro_ptro_257, retro_ptro_2650, retro_ptro_2801, retro_ptro_2812, retro_ptro_2840, retro_ptro_2913, retro_ptro_2970, retro_ptro_3187, retro_ptro_3276, retro_ptro_445, retro_ptro_493, retro_ptro_495, retro_ptro_512, retro_ptro_543, retro_ptro_552, retro_ptro_59, retro_ptro_590, retro_ptro_827, retro_ptro_939, retro_ptro_958,
Tarsius syrichta	ENSTSYG00000011519	possible_ortholog	42 retrogenes	retro_tsyr_114, retro_tsyr_1156, retro_tsyr_1165, retro_tsyr_1199, retro_tsyr_1227, retro_tsyr_1255, retro_tsyr_1270, retro_tsyr_13, retro_tsyr_1357, retro_tsyr_138, retro_tsyr_1382, retro_tsyr_1394, retro_tsyr_143, retro_tsyr_1487, retro_tsyr_1488, retro_tsyr_1506, retro_tsyr_1510, retro_tsyr_1551, retro_tsyr_1618, retro_tsyr_163, retro_tsyr_168, retro_tsyr_1680, retro_tsyr_1878, retro_tsyr_1881, retro_tsyr_1970, retro_tsyr_2019, retro_tsyr_2134, retro_tsyr_256, retro_tsyr_280, retro_tsyr_325, retro_tsyr_333, retro_tsyr_594, retro_tsyr_611, retro_tsyr_668, retro_tsyr_675, retro_tsyr_726, retro_tsyr_772, retro_tsyr_83, retro_tsyr_857, retro_tsyr_927, retro_tsyr_959, retro_tsyr_97,
Tursiops truncatus	ENSTTRG00000005681	possible_ortholog	5 retrogenes	retro_ttru_1392, retro_ttru_1443, retro_ttru_3, retro_ttru_345, retro_ttru_788,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_ggor_23	94.38	98.89	Please wait, loading	Please wait, loading	Please wait, loading
2.	retro_ggor_38	90.00	100.00	Please wait, loading	Please wait, loading	Please wait, loading
3.	retro_ggor_40	95.56	100.00	Please wait, loading	Please wait, loading	Please wait, loading
4.	retro_ggor_54	94.44	100.00	Please wait, loading	Please wait, loading	Please wait, loading
5.	retro_ggor_114	91.11	100.00	Please wait, loading	Please wait, loading	Please wait, loading
6.	retro_ggor_146	85.56	100.00	Please wait, loading	Please wait, loading	Please wait, loading
7.	retro_ggor_162	86.67	100.00	Please wait, loading	Please wait, loading	Please wait, loading
8.	retro_ggor_166	84.44	100.00	Please wait, loading	Please wait, loading	Please wait, loading
9.	retro_ggor_182	98.89	100.00	Please wait, loading	Please wait, loading	Please wait, loading
10.	retro_ggor_186	85.56	100.00	Please wait, loading	Please wait, loading	Please wait, loading
11.	retro_ggor_197	73.33	100.00	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSGGOG00000000971 retrocopies

Parental gene:	HMGN2, ENSGGOG00000000971
Aliases:	None
Description:	None
Organism:	*Gorilla (Gorilla gorilla)*
Coordinates:	1:27417032..27419558(+)

Parental gene:

HMGN2, ENSGGOG00000000971