RetrogeneDB ID: | retro_vpac_241 | ||
Retrocopylocation | Organism: | Alpaca (Vicugna pacos) | |
Coordinates: | GeneScaffold_319:1383062..1383437(-) | ||
Located in intron of: | ENSVPAG00000009136 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ANXA2 | ||
Ensembl ID: | ENSVPAG00000007888 | ||
Aliases: | None | ||
Description: | annexin A2 [Source:HGNC Symbol;Acc:537] |
Percent Identity: | 70.4 % |
Parental protein coverage: | 53.91 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | SFKMSTVHEILCKLSLEGDHSTPASAYGSVKAYTNFDAERDALNIETAIKTKGVDEVTIVNILTNRSNEQ |
S.K.STV.E.LC..SLEGDH..P..AY.SVK.Y..FDAE.DALNIE.AIK.KGVDEVTI.NILTN.SNEQ | |
Retrocopy | SIKLSTVYESLCRRSLEGDHCEPPNAYRSVKVYSSFDAEPDALNIEMAIKIKGVDEVTIANILTNCSNEQ |
Parental | RQDIAFAYQRRTKKELASALKSALSGHLETVILGLLKTPAQYDASELKA-SMKGL |
RQ.I.FA.Q.RT.KE.ASALKSALSGH...VI...LK.PAQ...S.LKA.SMKGL | |
Retrocopy | RQNITFAFQGRTNKEFASALKSALSGHPKKVIWYVLKAPAQWEESKLKACSMKGL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Canis familiaris | ENSCAFG00000016686 | 3 retrocopies | |
Felis catus | ENSFCAG00000007862 | 2 retrocopies | |
Macropus eugenii | ENSMEUG00000008980 | 3 retrocopies | |
Myotis lucifugus | ENSMLUG00000002464 | 3 retrocopies | |
Monodelphis domestica | ENSMODG00000011604 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000000762 | 2 retrocopies | |
Otolemur garnettii | ENSOGAG00000009952 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000007132 | 2 retrocopies | |
Tupaia belangeri | ENSTBEG00000001276 | 1 retrocopy | |
Tarsius syrichta | ENSTSYG00000003719 | 1 retrocopy | |
Vicugna pacos | ENSVPAG00000007888 | 2 retrocopies |
retro_vpac_241 , retro_vpac_27,
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