Parental gene:

ANXA2, ENSCAFG00000016686

Aliases:None
Description:Canis lupus familiaris annexin A2 (ANXA2), mRNA. [Source:RefSeq mRNA;Acc:NM_001002961]
Organism:Dog (Canis familiaris)
Coordinates:30:25175867..25210255(-)


>ENSCAFG00000016686
ATGTCTACTGTTCACGAAATTCTCTGCAAGCTCAGCTTGGAGGGTGATCATTCCACACCCCCGAGTGCATACGGGTCGGT
CAAAGCATACACTAATTTTGATGCTGAGCGTGATGCTCTGAACATTGAAACGGCCATCAAGACCAAAGGTGTGGATGAGG
TCACCATTGTCAACATTTTGACCAACCGCAGCAATGAACAGAGACAGGACATTGCCTTTGCCTACCAGAGAAGGACTAAA
AAGGAACTTGCATCAGCATTGAAGTCAGCCTTGTCCGGCCACCTGGAGACCGTGATTTTGGGCCTATTGAAAACACCTGC
TCAGTATGACGCTTCTGAACTGAAAGCCTCCATGAAGGGGCTGGGGACTGATGAGGACTCCCTCATTGAGATCATCTGCT
CAAGGACCAACCAAGAACTTCAGGAAATTAACAGAGTCTACAAGGAAATGTACAAGACCGATCTGGAGAAGGACATCATT
TCTGACACATCTGGTGACTTCCGCAAGCTGATGGTTGCCCTTGCAAAGGGTAGAAGAGCAGAGGATGGGTCTGTCATCGA
TTATGAACTGATTGACCAAGATGCCCGGGATCTCTATGATGCTGGAGTGAAGAGGAAAGGAACTGATGTGCCCAAGTGGA
TCAGCATCATGACCGAGAGGAGTGTGTGTCACCTCCAGAAAGTATTTGAAAGGTACAAGAGCTACAGCCCTTATGACATG
CTGGAGAGCATCAAGAAGGAGGTCAAAGGAGACCTGGAAAATGCTTTCCTGAACCTGGTCCAGTGCATTCAGAACAAGCC
CCTGTATTTTGCTGACCGACTGTACGACTCCATGAAGGGCAAGGGGACTCGTGATAAAGTCCTGATTAGAATCATGGTCT
CTCGCAGTGAAGTGGACATGTTGAAAATTAGGTCTGAATTCAAGAGAAAGTATGGCAAGTCCCTGTACTACTACATCCAG
CAAGACACCAAGGGCGACTACCAGAAAGCGCTGCTGTACCTGTGTGGTGGGGATGACTGA

Library Parental gene expression (RPM)
SRP012049_cerebellum 20 .12 RPM
SRP017611_brain 18 .02 RPM
SRP017611_kidney 99 .39 RPM
SRP017611_liver 9 .86 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008055 possible_ortholog 2 retrogenes
retro_amel_1531, retro_amel_1836,
Bos taurus ENSBTAG00000009615 possible_ortholog 2 retrogenes
retro_btau_634, retro_btau_985,
Canis familiaris ENSCAFG00000014749 other_paralog 1 retrogene
retro_cfam_1107,
Choloepus hoffmanni ENSCHOG00000012143 ortholog_one2one 3 retrogenes
retro_chof_1028, retro_chof_1965, retro_chof_815,
Equus caballus ENSECAG00000012670 possible_ortholog 1 retrogene
retro_ecab_759,
Felis catus ENSFCAG00000007862 possible_ortholog 2 retrogenes
retro_fcat_594, retro_fcat_709,
Homo sapiens ENSG00000182718 possible_ortholog 3 retrogenes
retro_hsap_3114, retro_hsap_4150, retro_hsap_580,
Gorilla gorilla ENSGGOG00000009738 possible_ortholog 3 retrogenes
retro_ggor_2137, retro_ggor_2788, retro_ggor_515,
Macropus eugenii ENSMEUG00000008980 ortholog_one2many 3 retrogenes
retro_meug_1000, retro_meug_312, retro_meug_389,
Myotis lucifugus ENSMLUG00000002464 possible_ortholog 3 retrogenes
retro_mluc_1569, retro_mluc_2223, retro_mluc_2431,
Monodelphis domestica ENSMODG00000011604 ortholog_one2many 1 retrogene
retro_mdom_1471,
Mustela putorius furo ENSMPUG00000000762 possible_ortholog 2 retrogenes
retro_mputfur_73, retro_mputfur_79,
Nomascus leucogenys ENSNLEG00000011678 possible_ortholog 2 retrogenes
retro_nleu_769, retro_nleu_802,
Otolemur garnettii ENSOGAG00000009952 possible_ortholog 1 retrogene
retro_ogar_3510,
Pongo abelii ENSPPYG00000006526 possible_ortholog 2 retrogenes
retro_pabe_2572, retro_pabe_607,
Pan troglodytes ENSPTRG00000007132 possible_ortholog 2 retrogenes
retro_ptro_2106, retro_ptro_81,
Pteropus vampyrus ENSPVAG00000011401 ortholog_one2one 1 retrogene
retro_pvam_389,
Tupaia belangeri ENSTBEG00000001276 possible_ortholog 1 retrogene
retro_tbel_3335,
Tarsius syrichta ENSTSYG00000003719 possible_ortholog 1 retrogene
retro_tsyr_2086,
Tursiops truncatus ENSTTRG00000007705 possible_ortholog 1 retrogene
retro_ttru_1725,
Vicugna pacos ENSVPAG00000007888 possible_ortholog 2 retrogenes
retro_vpac_241, retro_vpac_27,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_367 78.05 84.37
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2. retro_cfam_707 89.08 86.14
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3. retro_cfam_1631 83.14 99.71
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Download FASTA sequences of all ENSCAFG00000016686 retrocopies