RetrogeneDB ID: | retro_meug_389 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold108432:6856..7508(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMEUG00000003963 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ANXA2 | ||
Ensembl ID: | ENSMEUG00000008980 | ||
Aliases: | None | ||
Description: | annexin A2 [Source:HGNC Symbol;Acc:537] |
Percent Identity: | 88.69 % |
Parental protein coverage: | 64.33 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | GLGTDEDSLIEIICSRTNSELYEINRVYREMYKTELEKDIISDTSGDFRKLMVALAKGRRAEDGSVIDYE |
GLGTDED.LIEII..RTNSELY.IN.V.R.MYKTELEKDIISDTSGDFRKLMVALAKGRRAEDGS.IDYE | |
Retrocopy | GLGTDEDCLIEIIYLRTNSELYKINKVCR*MYKTELEKDIISDTSGDFRKLMVALAKGRRAEDGSAIDYE |
Parental | LIDQDARELYDAGVKRKGTDVPKWISIMTERSVCHLQKVFERYKSYSPYDMLESIKKEVKGDLENAFLNL |
LIDQDAREL.DAGVKRKGTDVPKWIS.MTERSVCHLQKVFERYKSYSPYDMLESIKKEVKG.LEN.FL.L | |
Retrocopy | LIDQDARELSDAGVKRKGTDVPKWISTMTERSVCHLQKVFERYKSYSPYDMLESIKKEVKGNLENVFLYL |
Parental | VQCIQNKPLYFADRLYDSM-KGKGTRDKVLIRIMVSRSEVDMLKIKSEFKRKYGKSLYYFIQQDTKGDYQ |
VQCI.NKPL.FAD.LYDSM.KGKGTRDKVLI.IMVS.SEVDMLKI.SEFKRKYGKSLYYFIQQDTKG.YQ | |
Retrocopy | VQCI*NKPLCFAD*LYDSM>KGKGTRDKVLIWIMVSCSEVDMLKIRSEFKRKYGKSLYYFIQQDTKGNYQ |
Parental | KALLYLCGGDD |
K...YLC.GDD | |
Retrocopy | K---YLCRGDD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |