Parental gene: | AT5G47540 |
| Aliases: | None |
| Description: | Putative MO25-like protein At5g47540 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGK3] |
| Organism: | Mouse-ear cress (Arabidopsis thaliana) |
| Coordinates: | 5:19283028..19285698(-) |
>AT5G47540
ATGAAAGGGCTTTTCAAGTCTAAGCCACGCACTCCTGCTGACCTTGTTCGACAAACCCGCGATCTCCTTCTCTTCTCCGA
TCGATCTACCTCTTTGCCTGACCTCCGAGATTCCAAACGCGACGAAAAGATGGCGGAATTAAGCCGGAATATCCGTGACA
TGAAGTCGATTCTCTACGGGAACAGCGAAGCAGAGCCTGTGGCAGAAGCTTGTGCACAGTTGACTCAAGAATTCTTTAAA
GAGGATACTCTACGTCTCTTGATTACTTGTCTCCCTAAACTTAACTTGGAGACGAGGAAAGATGCTACACAAGTTGTTGC
AAATCTACAGAGGCAACAGGTTAATTCACGGTTGATTGCTTCTGATTATTTAGAAGCCAACATTGATCTCATGGATGTTT
TGATTGAAGGCTTCGAGAACACAGACATGGCTTTACACTATGGTGCTATGTTTAGGGAGTGTATCCGTCATCAGATTGTG
GCTAAATATGTTTTGGAGTCTGACCATGTGAAGAAATTCTTTGATTACATACAGCTTCCAAATTTCGACATTGCTGCCGA
TGCTGCTGCTACTTTTAAGGAACTGCTGACAAGGCATAAGTCTACTGTTGCCGAGTTTCTCACCAAGAATGAAGACTGGT
TTTTCGCAGACTACAACTCAAAGCTTCTTGAATCAAGTAATTATATAACCAGACGGCAAGCTATTAAGTTGTTGGGTGAT
ATATTATTGGATCGATCAAATTCAGCTGTGATGACGAAATATGTGAGCTCGAGGGATAACTTGAGGATTCTCATGAATCT
TCTAAGAGAGTCAAGCAAGAGTATCCAAATAGAAGCATTCCATGTCTTTAAGCTGTTTGCAGCGAACCAAAACAAGCCTG
CGGATATAGTCAACATTCTGGTGGCCAACAGAAGCAAGCTTCTGAGATTGTTGGCTGATTTGAAACCAGACAAAGAGGAT
GAGAGGTTTGAAGCAGACAAAAGTCAGGTTTTGAGAGAAATCGCAGCCCTTGAACCTCGAGATCTTGCTTGA
ATGAAAGGGCTTTTCAAGTCTAAGCCACGCACTCCTGCTGACCTTGTTCGACAAACCCGCGATCTCCTTCTCTTCTCCGA
TCGATCTACCTCTTTGCCTGACCTCCGAGATTCCAAACGCGACGAAAAGATGGCGGAATTAAGCCGGAATATCCGTGACA
TGAAGTCGATTCTCTACGGGAACAGCGAAGCAGAGCCTGTGGCAGAAGCTTGTGCACAGTTGACTCAAGAATTCTTTAAA
GAGGATACTCTACGTCTCTTGATTACTTGTCTCCCTAAACTTAACTTGGAGACGAGGAAAGATGCTACACAAGTTGTTGC
AAATCTACAGAGGCAACAGGTTAATTCACGGTTGATTGCTTCTGATTATTTAGAAGCCAACATTGATCTCATGGATGTTT
TGATTGAAGGCTTCGAGAACACAGACATGGCTTTACACTATGGTGCTATGTTTAGGGAGTGTATCCGTCATCAGATTGTG
GCTAAATATGTTTTGGAGTCTGACCATGTGAAGAAATTCTTTGATTACATACAGCTTCCAAATTTCGACATTGCTGCCGA
TGCTGCTGCTACTTTTAAGGAACTGCTGACAAGGCATAAGTCTACTGTTGCCGAGTTTCTCACCAAGAATGAAGACTGGT
TTTTCGCAGACTACAACTCAAAGCTTCTTGAATCAAGTAATTATATAACCAGACGGCAAGCTATTAAGTTGTTGGGTGAT
ATATTATTGGATCGATCAAATTCAGCTGTGATGACGAAATATGTGAGCTCGAGGGATAACTTGAGGATTCTCATGAATCT
TCTAAGAGAGTCAAGCAAGAGTATCCAAATAGAAGCATTCCATGTCTTTAAGCTGTTTGCAGCGAACCAAAACAAGCCTG
CGGATATAGTCAACATTCTGGTGGCCAACAGAAGCAAGCTTCTGAGATTGTTGGCTGATTTGAAACCAGACAAAGAGGAT
GAGAGGTTTGAAGCAGACAAAAGTCAGGTTTTGAGAGAAATCGCAGCCCTTGAACCTCGAGATCTTGCTTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Brassica rapa | Bra022139 | ortholog_one2many | 1 retrogene | |
| Populus trichocarpa | POPTR_0006s01590 | ortholog_many2many | 1 retrogene | |
| Arabidopsis lyrata | scaffold_800035.1 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_atha_11 | 65.60 | 99.71 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all AT5G47540 retrocopies