Parental gene:

Bra022139

Aliases:None
Description:AT5G47540 (E=9e-185) | binding
Organism:Chinese cabbage (Brassica rapa)
Coordinates:A02:19646114..19648131(-)


>Bra022139
ATGAAGGGTCTATTCAAGTCCAAGCCTCGCACTCCTGCTGACATCGTCCGTCAGACCCGTGATCTCCTTCTCTACGCTGA
TCGATCCAAGTCTTTGCCTGACCTCCGTGAATCCAAACGCGAAGAAAAGATGGCGGAGCTAAGCAGGAACATCCGTGATA
TGAAGTCTATTCTCTATGGAAACAGCGAGGCCGAGCCTGTGGCTGAAGCTTGTGCTCAATTGACTCAAGAGTTCTTTAGA
GAAGATACTCTACGTCTCTTGATCACTTGTCTCCCTAAGCTCAACTTGGAGACGAGGAAAGATGCAACACAGCTAGTTGC
AAATCTACAGAGGCAACAAGTGAACTCAAGGTTGATTGCTTCTGATTATCTTGAAGCCAACCTTGACCTCATGGATGTTT
TGATGGAAGGGTTTGAGAATACGGACTTGGCTTTGCATTATGGTGCTATGTTTAGGGAGTGCATCCGCCATCAGATTGTT
GCCAGATATGTTCTGGAGTCTGAGCATGTGAAGAAGTTCTTTGATTACATACAGCTTCCTAACTTCGACATTGCTGCAGA
TGCTGCTGCAACTTTTAAGGAACTGCTAACTAGGCATAAGTCTACTGTTGCTGAGTTTCTCATCAAGAATGAAGACTGGT
TTTTCGCGGACTACAACTCAAAGCTTCTTGAATCAAGTAACTATATAACCAGACGGCAAGCTATTAAGTTGCTGGGTGAT
ATATTACTGGATCGATCAAACTCAGCTGTGATGACGAGATATGTGAGCTCAAGGGACAACTTGAGGATTCTCATGAATCT
TCTTAGGGAGTCAAGCAAGAGCATCCAGATAGAAGCGTTTCATGTTTTCAAGCTGTTTGCAGCGAACCAAAACAAGCCTG
CTGATATAATCAACATTCTGGTGGCAAACAAAAGCAAGCTTCTAAGATTGTTGGCTGATTTGAAACCAGACAAAGAGGAC
GAGAGGTTTGAAGCAGATAAGAGTCAGGTCTTGAGAGAAATTGCAGCCCTTGAGCCTCGAGATCTTGCTTGA

Species Parental gene accession Homology type Retrogenes number
Arabidopsis thaliana AT5G47540 ortholog_one2many 1 retrogene
retro_atha_11,
Populus trichocarpa POPTR_0006s01590 ortholog_many2many 1 retrogene
retro_ptri_1,
Arabidopsis lyrata scaffold_800035.1 ortholog_one2many 1 retrogene
retro_alyr_20,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_brap_1 66.27 98.25
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Download FASTA sequences of all Bra022139 retrocopies