Parental gene:

POPTRDRAFT_818946, POPTR_0006s01590

Aliases:None
Description:Predicted protein [Source:UniProtKB/TrEMBL;Acc:B9HCU5]
Organism:Western balsam poplar (Populus trichocarpa)
Coordinates:6:961222..966195(+)


>POPTR_0006s01590
ATGAAGGGACTTTTCAAGTCAAAGCCGAGAACTCCTGTCGATGTTGTTAGACAGACTCGCGATCTGTTAATCTATGTTGA
TCGGAGTTCATCTTCTTTGTCTGATTCAAAACGAGAAGAGAAGATGGCAGAATTAGCTAAAAATACCAGGGAGTTAAAGT
CAATTCTTTATGGAAATAGTGAATCTGAACCAGTGTCAGAAGCGTGTGCACAATTGACTCAGGAGTTCTTCAGAGAGAAC
ACACTTCGTCTTTTGATCATCTGTCTTCCAAAATTGAACTTAGAGACCCGAAAAGATGCCACTCAGGTTGTTGCAAATCT
ACAAAGGCAACAAGTTAATTCAAGATTGATTGCATCAGACTACTTGGAGAAAAATACAGATCTTTTAGATATTTTGATAG
CAGGTTATGAAAACACAGACATGGCTTTGCACTATGGTGTAATGTTGAAGGAGTGCATCCGTCACCAGAGTGTTGCAAGA
TATGTCCTGGAATCACCACACGTGAAGAAATTCTTTGATTATATACAACTTCCAAATTTCGACATTTCTGCAGATGCTGC
TGCAACTTTCAAGGAACTCTTGACAAGACATAAATCTACAGTAGCTGAATTTCTTTCTAAAAACTATGACTGGTTCTTTG
CCGAATTTAATTCGAAGCTGCTAGAGTCCACCAATTACATTACAAGACGACAATCTATCAAGCTGTTGGGAGATATGTTA
TTGGATCGCTCTAATGCAGTCGTGATGACGAGATATGTGAGCTCGAGGGATAACTTGAGGATTCTTATGAATCTTCTCAG
GGAATCAAGTAAGAGCATCCAGACAGAAGCCTTTCATGTTTTCAAGCTTTTTGTTGCAAACCAAAATAAACCTCCCGACA
TAGTTAGTATACTTGTTGCAAATAGAAGCAAGCTTCTTCGTTTGTTAGCTGATTTCAAGATAGATAAAGAGGATGAACAA
TTTGAGGCAGACAAAGCTCAAATTGTGAAAGAAATAGCTGCCCTTGAACCTAGAGAGTAG

Species Parental gene accession Homology type Retrogenes number
Arabidopsis thaliana AT5G47540 ortholog_many2many 1 retrogene
retro_atha_11,
Brassica rapa Bra022139 ortholog_many2many 1 retrogene
retro_brap_1,
Arabidopsis lyrata scaffold_800035.1 ortholog_many2many 1 retrogene
retro_alyr_20,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptri_1 72.17 90.27
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Download FASTA sequences of all POPTR_0006s01590 retrocopies