Parental gene: | Bra015463 |
| Aliases: | None |
| Description: | AT1G05890 (E=4e-251) | zinc finger protein-related |
| Organism: | Chinese cabbage (Brassica rapa) |
| Coordinates: | A10:1611578..1616087(-) |
>Bra015463
ATGGATTCAGAGGATGACTTGCTCGGTACCCACGATATGGAATCGGGAGAGGATGATTTTTACAGCGGTGGTGGGTCGGA
TGATGATTACATCGAAAGCGATGGTGATGAGCCCGATTACGGTTTCGTTGAGGAAGACGTGGATGATTCCCTCATGATCG
CCTCTCATCGCTCTCAGATAAATTATGTTGTTCTCAAGGAAGAAGATATCCGCAAGCTTCAGATGGATGATATTGGAAGA
GTCTCCATGGTCCTTTCCATAAGCGAGGCTGAAGCAAGCATTTTACTTCTTCACTATCACTGGAGTGTGAGTAAAGTTCA
TGATGAATGGTTTGCGGATGAGGAGGGAGTTCGGAAAGCTGTTGGCATATTGGAGAGACCTGTTGTTTCAGCCCCTCACG
GCGGAGAACTTACATGTGGAATATGCTTTGAACCCTTCCAACGTGAAGAAGTTGTATCGCTTGCTTGTGGTCATCCTTTC
TGCTCTACCTGCTGGACTGGTTATATCAGTACAACCATCAATGATGGCCCAGGATGCTTGATGCTAAAGTGTCCCGAGCC
TTCTTGCCCTGCTGCTGTTGGTCAAGATATGTTCGAAAAATTCGCTTCCAAGGAAGACAAAGAGAAGTACTACAAATATT
TTCTTAGGTCTTATATTGAAGACAACAGAAAGATGAAGTGGTGCCCTGCCCCAGGATGTGAGAATGCAATTGAGTTTGCT
GCCGGGACTAGCAATTATGATGTTTCCTGCTTGTGTTCACGGAGCTTTTGCTGGAATTGCACTGAAGAGGCTCACCGTCC
TGTGGATTGTCACACAGTAGCACAATGGATACGTAAAAATAGCGCTGAATCCGAAAATATGAACTGGATACTTGCAAATT
CAAAGCCTTGCCCAAAGTGTAAGCGGCCAATTGAAAAGAATCATGGATGCATGCACATGACATGCACACCACCTTGTAAA
TATGAGTTTTGTTGGCTTTGCCTTAATGCATGGACAGCTCACGGGGAAAGAACTGGTGGTTTTTATGCCTGCAACCGGTA
TGAGTCAGCCAAGCAAGAAGGACTATATGATGAGGCTGAAAAGAGGAGAGAGATGGCAAAAAATTCGCTCGAGAGATACA
CTCATTATTATGAACGCTGGGCAAGCAATCAGACGTCGAGGCAGAAAGCTGTGGAGGATCTGCAGAAAGCGCAATTGGAA
AAGCTGGAGAAGCTTAGTGACATACAATGCACTCCAGAATCTCAGCTGAAGTTCATCTCAGAGGCGTGGCTTCAGATCAT
TGAATGCAGACGTGTACTGAAATGGACATATGCATATGGGTACTATCTACCTGATCACGATAAGAAACAATTTTTTGAGT
ATTTGCAAGGGGAGGCTGAGTCAGGTTTGGAGAGGCTCCACAAATGCGTAGAGAAGGAACTGGAGGTGTTTCTAGTTGCT
GAAGGCCCTTCAGATGACTTCAATCATTTCCGGACAAAGTTAACTGGTTTGACCAGCATAACGAAAACCTACTTTGAGAA
TCTGGTGAAAGCTCTGGAGAATGGTCTTGCTGATGTGGATACACAAGGGACTAGCAGCAAATCAACAAGCTCTAAATCTA
GCAAGACGAAAGGCAGTGGGAAAGGTAAAGGAAGCTCCAGAAATGGCGGGTCCAGCAAAAGCTCAGATGGAAACTGA
ATGGATTCAGAGGATGACTTGCTCGGTACCCACGATATGGAATCGGGAGAGGATGATTTTTACAGCGGTGGTGGGTCGGA
TGATGATTACATCGAAAGCGATGGTGATGAGCCCGATTACGGTTTCGTTGAGGAAGACGTGGATGATTCCCTCATGATCG
CCTCTCATCGCTCTCAGATAAATTATGTTGTTCTCAAGGAAGAAGATATCCGCAAGCTTCAGATGGATGATATTGGAAGA
GTCTCCATGGTCCTTTCCATAAGCGAGGCTGAAGCAAGCATTTTACTTCTTCACTATCACTGGAGTGTGAGTAAAGTTCA
TGATGAATGGTTTGCGGATGAGGAGGGAGTTCGGAAAGCTGTTGGCATATTGGAGAGACCTGTTGTTTCAGCCCCTCACG
GCGGAGAACTTACATGTGGAATATGCTTTGAACCCTTCCAACGTGAAGAAGTTGTATCGCTTGCTTGTGGTCATCCTTTC
TGCTCTACCTGCTGGACTGGTTATATCAGTACAACCATCAATGATGGCCCAGGATGCTTGATGCTAAAGTGTCCCGAGCC
TTCTTGCCCTGCTGCTGTTGGTCAAGATATGTTCGAAAAATTCGCTTCCAAGGAAGACAAAGAGAAGTACTACAAATATT
TTCTTAGGTCTTATATTGAAGACAACAGAAAGATGAAGTGGTGCCCTGCCCCAGGATGTGAGAATGCAATTGAGTTTGCT
GCCGGGACTAGCAATTATGATGTTTCCTGCTTGTGTTCACGGAGCTTTTGCTGGAATTGCACTGAAGAGGCTCACCGTCC
TGTGGATTGTCACACAGTAGCACAATGGATACGTAAAAATAGCGCTGAATCCGAAAATATGAACTGGATACTTGCAAATT
CAAAGCCTTGCCCAAAGTGTAAGCGGCCAATTGAAAAGAATCATGGATGCATGCACATGACATGCACACCACCTTGTAAA
TATGAGTTTTGTTGGCTTTGCCTTAATGCATGGACAGCTCACGGGGAAAGAACTGGTGGTTTTTATGCCTGCAACCGGTA
TGAGTCAGCCAAGCAAGAAGGACTATATGATGAGGCTGAAAAGAGGAGAGAGATGGCAAAAAATTCGCTCGAGAGATACA
CTCATTATTATGAACGCTGGGCAAGCAATCAGACGTCGAGGCAGAAAGCTGTGGAGGATCTGCAGAAAGCGCAATTGGAA
AAGCTGGAGAAGCTTAGTGACATACAATGCACTCCAGAATCTCAGCTGAAGTTCATCTCAGAGGCGTGGCTTCAGATCAT
TGAATGCAGACGTGTACTGAAATGGACATATGCATATGGGTACTATCTACCTGATCACGATAAGAAACAATTTTTTGAGT
ATTTGCAAGGGGAGGCTGAGTCAGGTTTGGAGAGGCTCCACAAATGCGTAGAGAAGGAACTGGAGGTGTTTCTAGTTGCT
GAAGGCCCTTCAGATGACTTCAATCATTTCCGGACAAAGTTAACTGGTTTGACCAGCATAACGAAAACCTACTTTGAGAA
TCTGGTGAAAGCTCTGGAGAATGGTCTTGCTGATGTGGATACACAAGGGACTAGCAGCAAATCAACAAGCTCTAAATCTA
GCAAGACGAAAGGCAGTGGGAAAGGTAAAGGAAGCTCCAGAAATGGCGGGTCCAGCAAAAGCTCAGATGGAAACTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Arabidopsis thaliana | AT1G05890 | ortholog_one2one | 1 retrogene | |
| Brassica oleracea | Bo5g007100 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS04G0492100 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_brap_11 | 68.93 | 90.86 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all Bra015463 retrocopies