Parental gene: | Bo5g007100 |
| Aliases: | None |
| Description: | None |
| Organism: | Brassica oleracea |
| Coordinates: | C5:2202087..2206306(+) |
>Bo5g007100
ATGGATTCAGAGGATGACTTGCTCGGTGCCCACGATATGGAATCGGGAGAGGATGATTTTTACAGCGGTGGTGGGTCTGA
TGATGATTACAACGAAACCGATGGTGATGAGCCCGATTACGGCTTCGTCGAGGAAGACGTGGATGATTCCGTCATGATCG
CCTCTCATCGCTCTCAGATAAATTATGTTGTCCTCAAGGAAGAAGATATCCGCAGGCTTCAGATGGATGATATTGGAAGA
GTTTCCATGGTCCTTTCCATAAGCGAGGCCGAAGCCAGCATTTTGCTTCTTCACTATCACTGGAGCGTGAGTAAAGTTCA
TGATGAATGGTTCGCGGATGAGGAGAGAGTTCGGAAAGCTGTTGGCATATTGGAGAGACCTGTTGTCTCCACCCTTGACG
GTGGAGAACTTACATGTGGAATATGCTTTGAACCCTTCCAACGTGAAGAAGTTGTATCGCTTGCTTGTGGTCATCCTTTC
TGCTCTACCTGCTGGACTGGTTATATCAGCACAACCATCAATGATGGCCCAGGATGCTTGATGCTAAAGTGTCCGGAGCC
TTCTTGCCCTGCTGCTGTTGGTCAAGATATGTTTGAAAAATTCGCTTCTAAGGAAGACAAGGAGAAGTACTATAAATATT
TTCTTAGGTCTTATATTGAAGACAACAGAAAGATGAAGTGGTGTCCTGCCCCAGGATGTGAGAATGCAATTGAGTTTACT
GCCGGGACTAGTAATTATGATGTTTCCTGCTCGTGTTCACGGAGTTTTTGCTGGAATTGCACTGAAGAGGCTCACCGTCC
TGTGGATTGTCACACAGTAGCACAATGGATACGTAAGAACAGCGCGGAATCTGAAAATATGAACTGGATACTTGCAAATT
CAAAGCCTTGCCCGAAATGTAAGCGGCCAATTGAAAAGAATCATGGATGCATGCACATGACATGCACACCCCCTTGTAAA
TATGAGTTTTGTTGGCTTTGCCTTAATGCATGGACAGCTCACGGGGAAAGAACTGGTGGTTTTTATGCCTGCAACCGGTA
TGAGTCGGCTAAGCAAGAAGGACTGTATGATGAGGCTGAAAAGAGGAGAGAGATGGCAAAAAATTCACTCGAGAGATACA
CTCATTATTATGAACGTTGGGCAAGCAATCAGACGTCGAGGCAAAAAGCTGTGGAGGATCTGCAGAAAGCGCAATTGGAG
AAGCTTGAGAAGCTTAGTGACATACAATGCACTCCAGAATCTCAGCTGAAGTTCATCACAGAGGCGTGGCTTCAGATCAT
TGAATGCAGACGTGTACTGAAATGGACATATGCGTATGGATACTATCTACCTGATCACGATAAGAAACAATTTTTCGAGT
ACTTGCAAGGGGAGGCTGAGTCAGGTTTGGAGAGGCTCCACAAATGCGTAGAGAAGGAACTGGAGGTGTTTTTGAATGCT
GAAGGCTCTTCAGATAACTTCAATCATTTCCGGACAAAGTTAACTGGTTTGACCAGCATAACGAAAACCTACTTTGAAAA
TCTGGTGAAAGCTCTGGAGAATGGTCTTGCTGATGTGGATACTACGCAAGGGGCTAGCAGCAAATCAACAAGCTCTAAAT
CTAGCAAGACAAAAGGCGGTGGGAAAGGTAAAGGAAGCTCCAAAAGTAAAAACTCAGATGGAAATTGA
ATGGATTCAGAGGATGACTTGCTCGGTGCCCACGATATGGAATCGGGAGAGGATGATTTTTACAGCGGTGGTGGGTCTGA
TGATGATTACAACGAAACCGATGGTGATGAGCCCGATTACGGCTTCGTCGAGGAAGACGTGGATGATTCCGTCATGATCG
CCTCTCATCGCTCTCAGATAAATTATGTTGTCCTCAAGGAAGAAGATATCCGCAGGCTTCAGATGGATGATATTGGAAGA
GTTTCCATGGTCCTTTCCATAAGCGAGGCCGAAGCCAGCATTTTGCTTCTTCACTATCACTGGAGCGTGAGTAAAGTTCA
TGATGAATGGTTCGCGGATGAGGAGAGAGTTCGGAAAGCTGTTGGCATATTGGAGAGACCTGTTGTCTCCACCCTTGACG
GTGGAGAACTTACATGTGGAATATGCTTTGAACCCTTCCAACGTGAAGAAGTTGTATCGCTTGCTTGTGGTCATCCTTTC
TGCTCTACCTGCTGGACTGGTTATATCAGCACAACCATCAATGATGGCCCAGGATGCTTGATGCTAAAGTGTCCGGAGCC
TTCTTGCCCTGCTGCTGTTGGTCAAGATATGTTTGAAAAATTCGCTTCTAAGGAAGACAAGGAGAAGTACTATAAATATT
TTCTTAGGTCTTATATTGAAGACAACAGAAAGATGAAGTGGTGTCCTGCCCCAGGATGTGAGAATGCAATTGAGTTTACT
GCCGGGACTAGTAATTATGATGTTTCCTGCTCGTGTTCACGGAGTTTTTGCTGGAATTGCACTGAAGAGGCTCACCGTCC
TGTGGATTGTCACACAGTAGCACAATGGATACGTAAGAACAGCGCGGAATCTGAAAATATGAACTGGATACTTGCAAATT
CAAAGCCTTGCCCGAAATGTAAGCGGCCAATTGAAAAGAATCATGGATGCATGCACATGACATGCACACCCCCTTGTAAA
TATGAGTTTTGTTGGCTTTGCCTTAATGCATGGACAGCTCACGGGGAAAGAACTGGTGGTTTTTATGCCTGCAACCGGTA
TGAGTCGGCTAAGCAAGAAGGACTGTATGATGAGGCTGAAAAGAGGAGAGAGATGGCAAAAAATTCACTCGAGAGATACA
CTCATTATTATGAACGTTGGGCAAGCAATCAGACGTCGAGGCAAAAAGCTGTGGAGGATCTGCAGAAAGCGCAATTGGAG
AAGCTTGAGAAGCTTAGTGACATACAATGCACTCCAGAATCTCAGCTGAAGTTCATCACAGAGGCGTGGCTTCAGATCAT
TGAATGCAGACGTGTACTGAAATGGACATATGCGTATGGATACTATCTACCTGATCACGATAAGAAACAATTTTTCGAGT
ACTTGCAAGGGGAGGCTGAGTCAGGTTTGGAGAGGCTCCACAAATGCGTAGAGAAGGAACTGGAGGTGTTTTTGAATGCT
GAAGGCTCTTCAGATAACTTCAATCATTTCCGGACAAAGTTAACTGGTTTGACCAGCATAACGAAAACCTACTTTGAAAA
TCTGGTGAAAGCTCTGGAGAATGGTCTTGCTGATGTGGATACTACGCAAGGGGCTAGCAGCAAATCAACAAGCTCTAAAT
CTAGCAAGACAAAAGGCGGTGGGAAAGGTAAAGGAAGCTCCAAAAGTAAAAACTCAGATGGAAATTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Arabidopsis thaliana | AT1G05890 | ortholog_one2many | 1 retrogene | |
| Brassica oleracea | Bo8g005850 | within_species_paralog | 1 retrogene | |
| Brassica rapa | Bra015463 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS04G0492100 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_bole_13 | 66.12 | 96.94 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all Bo5g007100 retrocopies