Parental gene:

RBPJ, ENSBTAG00000003602

Aliases:None
Description:Recombining binding protein suppressor of hairless [Source:UniProtKB/Swiss-Prot;Acc:Q3SZ41]
Organism:Cow (Bos taurus)
Coordinates:6:47318339..47429147(+)


>ENSBTAG00000003602
ATGGCGCCTGTTGTGACAGGAAAATTTGGTGAGCGGCCTCCACCTAAACGACTCACTAGAGAAGCTATGCGAAATTATTT
AAAAGAGCGAGGGGATCAAACAGTGCTTATTCTTCATGCAAAAGTTGCACAGAAGTCATATGGAAATGAAAAAAGGTTTT
TTTGCCCTCCTCCTTGTGTATATCTTATGGGCAGTGGATGGAAGAAAAAAAAAGAACAAATGGAACGCGATGGTTGTTCA
GAACAGGAATCTCAACCATGTGCTTTTATTGGAATAGGAAATAGTGACCAAGAAATGCAGCAACTGAACTTGGAAGGAAA
GAACTATTGCACAGCCAAAACATTATATATATCTGATTCAGACAAGAGAAAGCACTTCATGCTGTCTGTAAAGATGTTCT
ATGGCAACAGTGATGACATTGGTGTGTTCCTAAGCAAGCGGATAAAAGTCATCTCCAAACCTTCCAAAAAGAAGCAGTCA
CTGAAAAATGCTGACCTCTGCATTGCCTCAGGAACAAAGGTGGCTCTGTTTAATAGACTCCGATCCCAGACAGTTAGCAC
CAGATACTTGCATGTAGAAGGTGGTAATTTCCATGCCAGTTCTCAGCAGTGGGGAGCATTTTACATTCATCTCTTGGATG
ATGATGAATCAGAAGGAGAAGAATTCACAGTCCGCGATGGATACATCCATTATGGACAAACAGTCAAACTTGTGTGTTCA
GTTACTGGCATGGCACTCCCAAGATTGATAATTAGGAAGGTTGATAAGCAGACCGCGTTACTGGATGCCGATGATCCTGT
GTCACAGCTCCACAAATGTGCGTTTTACCTTAAGGATACAGAAAGAATGTACTTGTGCCTTTCTCAAGAAAGAATAATCC
AGTTTCAGGCCACTCCATGCCCAAAAGAACCAAATAAAGAGATGATAAATGATGGAGCTTCCTGGACAATCATTAGTACG
GATAAGGCAGAGTATACATTTTATGAGGGGATGGGCCCTGTCCTCGCCCCAGTCACACCTGTGCCTGTCGTAGAAAGTCT
TCAGTTGAATGGCGGTGGGGACGTAGCAATGCTTGAACTTACAGGACAGAATTTCACTCCAAATTTACGAGTGTGGTTTG
GGGATGTAGAAGCTGAAACTATGTACAGATGTGGAGAGAGTATGCTCTGTGTTGTCCCAGACATTTCTGCATTCCGAGAA
GGCTGGAGATGGGTCCGGCAGCCAGTCCAGGTTCCAGTAACTTTGGTCCGTAATGATGGAATCATTTATTCCACCAGCCT
TACCTTTACCTATACCCCAGAACCAGGGCCACGGCCACACTGCAGTGCAGCGGGAGCAATCCTTCGAGCCAACTCAAGCC
AAGTGCCCCCTAATGAATCAAACACAAACAGCGAGGGAAGTTACACAAACGTCAGCACAAATTCAACCAGTGTCACATCA
TCTACAGCAACAGTTGTGTCCTAA

Library Parental gene expression (RPM)
SRP017611_brain 13 .89 RPM
SRP017611_kidney 16 .36 RPM
SRP017611_liver 5 .81 RPM
ERP005899_muscle 13 .41 RPM
ERP005899_liver 3 .24 RPM
SRP030211_testis 10 .21 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000001582 ortholog_one2one 4 retrogenes
retro_chof_1172, retro_chof_1278, retro_chof_2449, retro_chof_371,
Homo sapiens ENSG00000168214 ortholog_one2one 6 retrogenes
retro_hsap_4169, retro_hsap_4171, retro_hsap_4173, retro_hsap_4174, retro_hsap_4256, retro_hsap_4316,
Gorilla gorilla ENSGGOG00000004582 ortholog_one2one 1 retrogene
retro_ggor_2853,
Mus musculus ENSMUSG00000039191 ortholog_one2one 2 retrogenes
retro_mmus_2348, retro_mmus_2819,
Nomascus leucogenys ENSNLEG00000016895 ortholog_one2one 1 retrogene
retro_nleu_2305,
Oryctolagus cuniculus ENSOCUG00000013449 ortholog_one2one 1 retrogene
retro_ocun_1445,
Pan troglodytes ENSPTRG00000015968 ortholog_one2one 1 retrogene
retro_ptro_2829,
Tursiops truncatus ENSTTRG00000009022 ortholog_one2one 2 retrogenes
retro_ttru_1151, retro_ttru_1593,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1507 93.37 80.08
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Download FASTA sequences of all ENSBTAG00000003602 retrocopies