Parental gene:

RBPJ, ENSNLEG00000016895

Aliases:None
Description:None
Organism:Gibbon (Nomascus leucogenys)
Coordinates:GL397274.1:18510744..18618920(+)


>ENSNLEG00000016895
TTGGGTACATGCGCAGTGCCGCTCGCGCGGCCGCGCCAATCCTGCAGCGCCTTCAGCAGGTTTCGGGCGGCGAATTCCAG
TTCTCCGGGTTTTGGGGCTCCCTGCGGGAGGCAGTGCTGGATCTGGGAATCTCTAGGAAAGGAAAGGGCAAAGGAGGGGA
AAGATGGGGGGCTGCAGTCTCCACGTACGTCCCTCAAGGCGCGTCCCAAAACCCGGATAACTGGAGCGCTCCCCATGGAC
CACACGGAGGGTTCGCCCGCGGAGGAGCGGCCTGCGCATGCTCCATCGCCTGGGAAATTTGGTGAGCGGCCTCCACCTAA
ACGACTTACTAGGGAAGCTATGCGAAATTATTTAAAAGAGCGAGGGGATCAAACAGTACTTATTCTTCATGCAAAAGTTG
CACAGAAGTCATATGGAAATGAAAAAAGGTTTTTTTGCCCTCCTCCTTGTGTATATCTTATGGGCAGTGGATGGAAGAAA
AAAAAAGAACAAATGGAACGCGATGGTTGTTCTGAACAAGAGTCTCAACCGTGTGCATTTATTGGGATAGGAAATAGTGA
CCAAGAAATGCAGCAGCTAAACTTGGAAGGAAAGAACTATTGCACAGCCAAAACATTATATATATCTGATTCAGATAAGC
GAAAGCACTTCATGTTGTCTGTAAAGATGTTCTATGGCAACAGTGATGACATTGGTGTGTTCCTCAGCAAGCGGATAAAA
GTCATCTCCAAACCTTCCAAAAAGAAGCAGTCATTGAAAAATGCTGACTTATGCATTGCCTCAGGAACAAAGGTGGCTCT
GTTTAATCGACTACGATCCCAGACAGTTAGTACCAGATACTTGCATGTAGAAGGAGGTAATTTTCATGCCAGTTCACAGC
AGTGGGGAGCATTTTTTATTCATCTCTTGGATGATGATGAATCAGAAGGAGAAGAATTCACAGTCCGAGATGGCTACATC
CATTATGGACAAACAGTCAAACTTGTGTGCTCAGTTACTGGCATGGCACTCCCAAGATTGATAATTAGGAAAGTTGATAA
GCAGACCGCATTATTGGATGCAGATGATCCTGTGTCACAACTCCATAAATGTGCATTTTACCTTAAGGATACAGAAAGAA
TGTACTTGTGCCTTTCTCAAGAAAGAATAATTCAATTTCAGGCCACTCCATGTCCAAAAGAACCAAATAAAGAGATGATA
AATGATGGCGCTTCCTGGACAATCATTAGCACAGATAAGGCAGAATATACATTTTATGAGGGAATGGGCCCTGTCCTTGC
CCCAGTCACGCCTGTGCCTGTGGTAGAGAGCCTTCAGTTGAATGGCGGTGGGGACGTAGCAATGCTTGAACTTACAGGAC
AGAATTTCACTCCAAATTTACGAGTGTGGTTTGGTCCCGTAGAAGCTGAAACTATGTACAGGTGTGGAGAGAGTATGCTC
TGTGTCGTCCCAGACATTTCTGCATTCCGAGAAGGTTGGAGATGGGTCCGGCAACCAGTCCAGGTTCCAGTAACTTTGGT
CCGAAATGATGGAATCATTTATTCCACCAGCCTTACCTTTACCTACACACCAGAACCAGGGCCGCGGCCACATTGCAGTG
CAGCAGGAGCAATCCTTCGAGCCAGTTCAAGCCAGGTGCCCCCTAATGAATCAAACACAAACAGCGAGGGAAGTTACACA
AACGCCAGCACAAATTCAACCAGTGTCACATCATCTACAGCCACAGTGGTATCCTAA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000003602 ortholog_one2one 1 retrogene
retro_btau_1507,
Choloepus hoffmanni ENSCHOG00000001582 ortholog_one2one 4 retrogenes
retro_chof_1172, retro_chof_1278, retro_chof_2449, retro_chof_371,
Homo sapiens ENSG00000168214 ortholog_one2one 6 retrogenes
retro_hsap_4169, retro_hsap_4171, retro_hsap_4173, retro_hsap_4174, retro_hsap_4256, retro_hsap_4316,
Gorilla gorilla ENSGGOG00000004582 ortholog_one2one 1 retrogene
retro_ggor_2853,
Mus musculus ENSMUSG00000039191 ortholog_one2one 2 retrogenes
retro_mmus_2348, retro_mmus_2819,
Oryctolagus cuniculus ENSOCUG00000013449 ortholog_one2one 1 retrogene
retro_ocun_1445,
Pan troglodytes ENSPTRG00000015968 ortholog_one2one 1 retrogene
retro_ptro_2829,
Tursiops truncatus ENSTTRG00000009022 ortholog_one2one 2 retrogenes
retro_ttru_1151, retro_ttru_1593,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_nleu_2305 83.44 83.04
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Download FASTA sequences of all ENSNLEG00000016895 retrocopies