Parental gene:

USP22, ENSBTAG00000008978

Aliases:None
Description:Ubiquitin carboxyl-terminal hydrolase 22 [Source:UniProtKB/Swiss-Prot;Acc:P0C8Z3]
Organism:Cow (Bos taurus)
Coordinates:19:35728069..35746498(-)


>ENSBTAG00000008978
ATGGACGCGGAGCTCGTGGTGACGCCGCCGGGCTGCGCGCACCTGGGCAGCTTCAAGGTGGACAACTGGAAGCAGAACCT
GCGCGCCATCTACCAGTGCTTCGTGTGGAGCGGCTCAGCCGAGGCCCGCAAGCGGAAGGCGAAGTCGTGCGTATGTCATG
TGTGTGGCCTCCACCTGAATCGGCTGCACTCCTGCCTCCACTGTGTCTTCTTCGGCTGTTTCACAAAGAAGCACATTCAT
GAGCACGCCAAGTCCAAGAGGCACAACCTGGCCATCGAGCTCATGTACGGAGGTATCTACTGCTTTTTGTGTCAGGACTA
CATTTATGACAAAGACATAGAAATCATTGCCAAAGAGGAGCAGCGGAAAGCTTGGAAGATGCAAGGTGTCGGGGAGAAGT
TTTCAACATGGGAGCCGACCAAACGGGAGCTCGAGTTGCTGAAACACAACCCCAAGCGGCGGAAGATCACGTCCAACTGC
ACTATTGGTCTGCGCGGCCTCATCAACCTGGGGAACACGTGCTTCATGAACTGCATCGTGCAGGCGCTCACGCACACGCC
CCTGCTGCGCGACTTCTTCCTGTCCGACCGGCACCGCTGTGAGATGCAGAGCCCCAGCTCCTGCCTGGTCTGCGAGATGT
CCTCCCTGTTCCAGGAGTTCTACTCGGGGCACCGTTCCCCCCACATCCCATACAAACTGCTGCACCTCGTGTGGACTCAC
GCCCGGCACCTGGCAGGCTACGAGCAGCAGGACGCACACGAGTTCCTCATCGCAGCCCTGGATGTCCTGCACCGGCACTG
CAAAGGTGACGATAACGGAAAGAAGGCCAACAACCCCAACCACTGCAACTGTATCATAGACCAGATTTTCACAGGAGGGC
TGCAGTCTGACGTCACCTGCCAGGTGTGCCATGGGGTTTCCACCACCATCGACCCCTTCTGGGACATCAGCCTGGACCTC
CCTGGCTCTTCCACACCCTTCTGGCCGCTGAGCCCTGGAAGCGAGAGCAGTGTGGTAAATGGGGAGAGCCACGTGTCAGG
AACCACGACCCTCACCGACTGCCTGCGGAGATTTACCAGACCAGAGCACTTAGGAAGCAGTGCCAAGATCAAATGCAGCG
GTTGCCATAGCTACCAGGAGTCCACCAAGCAGCTCACCATGAAGAAGCTGCCCATTGTGGCCTGCTTCCACCTCAAACGG
TTTGAACACTCAGCCAAACTCCGGCGTAAGATCACCACCTACGTGTCCTTCCCCCTGGAGCTGGACATGACCCCCTTCAT
GGCCTCCAGCAAAGAGAGCAGGATGAACGGACAGTACCAGCAGCCGACAGACAGTCTCAACAATGACAACAAGTACTCGT
TGTTTGCGGTGGTCAACCACCAGGGGACCCTGGAGAGCGGCCACTACACCAGCTTCATCCGACAGCACAAGGACCAGTGG
TTCAAATGTGATGACGCCATCATCACCAAGGCCAGCATCGCGGACGTGCTGGACAGCGAGGGGTACTTGCTGTTCTACCA
CAAGCAGTTCCTGGAGTACGAGTAG

Library Parental gene expression (RPM)
SRP017611_brain 287 .92 RPM
SRP017611_kidney 361 .08 RPM
SRP017611_liver 98 .84 RPM
ERP005899_muscle 208 .62 RPM
ERP005899_liver 43 .11 RPM
SRP030211_testis 66 .06 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000018523 ortholog_one2one 1 retrogene
retro_cfam_125,
Homo sapiens ENSG00000124422 ortholog_one2one 1 retrogene
retro_hsap_26,
Microcebus murinus ENSMICG00000009998 ortholog_one2one 1 retrogene
retro_mmur_1,
Mus musculus ENSMUSG00000042506 ortholog_one2one 1 retrogene
retro_mmus_239,
Otolemur garnettii ENSOGAG00000015801 ortholog_one2one 1 retrogene
retro_ogar_274,
Pan troglodytes ENSPTRG00000008891 ortholog_one2one 1 retrogene
retro_ptro_44,
Pteropus vampyrus ENSPVAG00000001934 ortholog_one2one 1 retrogene
retro_pvam_905,
Ictidomys tridecemlineatus ENSSTOG00000023814 ortholog_one2one 1 retrogene
retro_itri_163,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_82 84.09 77.04
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Download FASTA sequences of all ENSBTAG00000008978 retrocopies