Parental gene:

USP22, ENSCAFG00000018523

Aliases:None
Description:ubiquitin specific peptidase 22 [Source:HGNC Symbol;Acc:12621]
Organism:Dog (Canis familiaris)
Coordinates:5:42496796..42519777(-)


>ENSCAFG00000018523
GAACGTAAGGCCAAGTCATGCGTCTGTCACGTTTGTGGTGTTCACCTGAACAGGCTCCACTCCTGCCTGCACTGTGTCTT
CTTTGGCTGCTTCACAAAGAAACATATTCATGAACATGCGAAGTCCAAGCGGCACAACCTGGCCATAGAACTTATGTATG
GAGGCATCTACTGCTTTTTGTGTCAGGACTACATATATGACAAAGATATAGAAATCATTGCCAAAGAGGAACAGCGGAAA
GCTTGGAAAATGCAAGGTGTTGGGGAGAAGTTTTCAACTTGGGAGCCAACCAAACGAGAGCTTGAACTGCTGAAACACAA
CCCGAAAAGGCGAAAGATCACCTCCAACTGCACCATAGGTCTGCGGGGACTGATCAACCTTGGAAACACGTGCTTCATGA
ACTGCATCGTCCAGGCTCTCACCCACACGCCACTTCTGCGAGATTTCTTCCTCTCCGACAGGCACCGGTGTGAGATGCAG
AGCCCCAGCTCATGTCTGGTCTGTGAGATGTCGTCACTTTTTCAGGAGTTTTACTCGGGGCACCGCTCCCCCCATATCCC
GTACAAGTTGCTGCACCTGGTGTGGACTCACGCGCGGCACCTGGCGGGGTACGAGCAGCAGGATGCGCACGAGTTCCTCA
TCGCAGCCCTGGACGTCCTGCACCGACACTGCAAAGGTGACGATAATGGGAAGAAGGCCAACAACCCCAATCACTGCAAC
TGCATCATAGATCAAATCTTCACGGGCGGGCTGCAGTCGGACGTCACCTGCCAAGTCTGCCATGGAGTCTCTACCACCAT
AGACCCCTTCTGGGACATCAGTTTAGATCTGCCTGGCTCTTCCACCCCGTTTTGGCCCCTGAGCCCAGGGAGTGAAGGCA
GCGTGGTGAATGGGGAAAGCCATGTAGCAGGAACCACTACGCTTACGGACTGCTTGAGGAGGTTTACCAGACCAGAGCAC
TTAGGAAGCAGTGCCAAGATCAAGTGTAGTGGCTGCCATAGCTACCAGGAGTCCACCAAGCAGCTCACCATGAAGAAACT
GCCCATTGTAGCCTGTTTTCATCTCAAACGATTTGAACACTCGGCCAAGCTGAGGCGGAAGATCACCACATACGTGTCAT
TCCCCCTGGAACTGGACATGACCCCCTTCATGGCATCCAGCAAAGAGAGCAGGATGAATGGACAGTACCAGCAGCCAACG
GATAGTCTCAACAATGACAATAAGTACTCCTTGTTTGCCGTAGTTAACCACCAGGGGACCCTGGAGAGTGGCCACTACAC
CAGCTTCATTCGGCAGCACAAGGACCAGTGGTTCAAATGTGACGATGCCATCATCACCAAGGCCAGCATTGAGGACGTGC
TGGACAGTGAGGGATACCTGCTGTTCTACCACAAACAGTTCCTGGAGTATGAGTAG

Library Parental gene expression (RPM)
SRP017611_brain 119 .88 RPM
SRP017611_kidney 33 .75 RPM
SRP017611_liver 23 .42 RPM
SRP012049_cerebellum 154 .81 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000008978 ortholog_one2one 1 retrogene
retro_btau_82,
Homo sapiens ENSG00000124422 ortholog_one2one 1 retrogene
retro_hsap_26,
Microcebus murinus ENSMICG00000009998 ortholog_one2one 1 retrogene
retro_mmur_1,
Mus musculus ENSMUSG00000042506 ortholog_one2one 1 retrogene
retro_mmus_239,
Otolemur garnettii ENSOGAG00000015801 ortholog_one2one 1 retrogene
retro_ogar_274,
Pan troglodytes ENSPTRG00000008891 ortholog_one2one 1 retrogene
retro_ptro_44,
Pteropus vampyrus ENSPVAG00000001934 ortholog_one2one 1 retrogene
retro_pvam_905,
Ictidomys tridecemlineatus ENSSTOG00000023814 ortholog_one2one 1 retrogene
retro_itri_163,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_125 84.09 84.08
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Download FASTA sequences of all ENSCAFG00000018523 retrocopies