Parental gene: | BT.52586, ENSBTAG00000009854 |
| Aliases: | None |
| Description: | U3 small nucleolar ribonucleoprotein protein MPP10 [Source:RefSeq peptide;Acc:NP_001039782] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 21:27906718..27919029(+) |
>ENSBTAG00000009854
ATGGCCCGGCCAGCCTGGCGTCGGCGGACCCTGGAGCGGTGCCTGAGGGAGGTCGGTAAAGCCACCGACAGCCCAGAGTG
CTTCCTCACCATTCAAGATGAACTGGCATCAAAGTTTACTTCTTTAACAAAAGTACTTTATGACTTTAATAAAGTACTAG
AGAATGACAGGAAACATGGGAGTCCTTTAAAAAAATTGATGATAAATAATTTCGATGATGAGCAGATTTGGCAACAGTTG
GAACTGCAAAATGAACCAATTTTACAGCACTTCCAGAGTGCAGTTAGTGAAACCATTGAAGATGAAGACATCAGTCTTCT
CCCAGAGAGTGAAGAGCAGGAGTGTGAAGAGGATGTGATGGAGCTGGAGGCTGCTGGCCAGGAGGACCTGGAACAAGATT
TAGAGGAGGAAGAGGTGGAGGAAGCAGAGGAGGTGGAAGTGTCAGACCTGAGTGCTGATGATCCTGAAGCAGATGAGAGA
GCCAAAAACTCAAGCAAATTGGATCTGAGGAAAAGCCCAGATTTCAGCGATGAGGACTCTGATCTTGATTTTGATATCAG
CAAACTAGAACGTCAGAGCAAGGTGCAAAGCAGAGTGCCTAGGAAACCAACAGAAAAGTCCATAGTAGATGATAAATTCT
TCAAGCTCTCTGAGATGGAGACCTTTTTGGAAAACATGGAAAAAGAAGAGGAACAAAGAGATGACCAAGAGGAAGATGAT
ATTGATTTTTTTGAAGATGTGGATTCCGATGAAGATGAAGGAGGACTGTTTGGAGGCCAGGATCTTAAGTCAGGTAAAAG
TTCCAGAAACCTGAAATACAAAGATTTCTTTGATCCAGTTGAAAGTGATGAAGACGTAGCAAGTGTCCAGGATGATGGGA
ATGAACTGGCTTCAAATGAAGAGGAAGAGATTGCTGAAGGAGAAGAAAGCATTTCTGAGACGGATGAAGATGATGACCTT
GAAGAAAGTGGAGACAGTAAACAACATAAAGAAACCTTGAAAAGAGTGACCTTTGCTCTGCCCAATGATGAGGACACTGA
AGATACAAATATCTTAAATGTACAGAAAGACTCTGATGAAGTCAAATCCTCTTTTGAAAAAAGACAAGAAAAGATGAATG
AAAAAATTGCATCTTTGGAAAAAGAGTTGTTGGAGAAGAAACCTTGGCAGCTTCAAGGAGAAGTGACAGCGCAGAAGCGG
CCCGAGAACAGCCTCCTGGAAGAGACCCTGCACTTCGACCACGCCGTGCGCATGGCACCTGTGATCACAGAGGAAACCAC
TCTCCAACTAGAGGATATCATTAAGCAGAGGATAAAAGATCAGGCTTGGGATGATGTCGTACGCAAAGAAAAGCCTAAAG
AGGATGCATTTGAGTATAAAAAGCGTTTAACACTGGACCACGAAAAGAGTAAATTGAGCCTTGCTGAAATTTACGAACAG
GAGTACATCAAACTCAACCAGCAAAAAACAGCAGAGGAAGAAAATCCAGAGCATGTAGAAATCCAGAAGATGATGGACTC
CCTCTTCTTAAAGTTGGATGCGCTCTCAAACTTCCACTTCATCCCCAAGCCACCTGTTCCAGAAATTAAAGTGGTATCAA
ATCTGCCTGCTGTCACCATGGAGGAGGTTGCCCCCGTGAGTGTCAGTGACGCAGCCCTCCTGGCCCCAGAGGAGGTCAAG
GAGAAAAATAAAGCTGGAGATATAAAAACAGCTGCTGAGAAAACAGCTACAGACAAGAAACGAGAAAGGAGGAAAAAGAA
ATATCAAAAGCATTTGAAAATAAAGGAGAAAGAAAAGCGGAGAAGACTTCTTGAAAAGAATAACCCAGACCAGGCAGGGA
GATACACCAAAGCAGTAGCCTCTGAGAAGCTGAAACAGCTGACCAAGACAGGAAAAGCCTCTCTGCTCAAGGATGAAGGT
AAAGACAAAGCCTTAAAATCATCTCAGGCATTCTTTTCTAAATTACAAGATCAAGTGAAAATGCAAATCAGCAATGCAAA
GAAAACCGAGAAGAAAAAGAAGAAAAACCAGGATATATCGGTTCATAAATTAAAGCTGTAA
ATGGCCCGGCCAGCCTGGCGTCGGCGGACCCTGGAGCGGTGCCTGAGGGAGGTCGGTAAAGCCACCGACAGCCCAGAGTG
CTTCCTCACCATTCAAGATGAACTGGCATCAAAGTTTACTTCTTTAACAAAAGTACTTTATGACTTTAATAAAGTACTAG
AGAATGACAGGAAACATGGGAGTCCTTTAAAAAAATTGATGATAAATAATTTCGATGATGAGCAGATTTGGCAACAGTTG
GAACTGCAAAATGAACCAATTTTACAGCACTTCCAGAGTGCAGTTAGTGAAACCATTGAAGATGAAGACATCAGTCTTCT
CCCAGAGAGTGAAGAGCAGGAGTGTGAAGAGGATGTGATGGAGCTGGAGGCTGCTGGCCAGGAGGACCTGGAACAAGATT
TAGAGGAGGAAGAGGTGGAGGAAGCAGAGGAGGTGGAAGTGTCAGACCTGAGTGCTGATGATCCTGAAGCAGATGAGAGA
GCCAAAAACTCAAGCAAATTGGATCTGAGGAAAAGCCCAGATTTCAGCGATGAGGACTCTGATCTTGATTTTGATATCAG
CAAACTAGAACGTCAGAGCAAGGTGCAAAGCAGAGTGCCTAGGAAACCAACAGAAAAGTCCATAGTAGATGATAAATTCT
TCAAGCTCTCTGAGATGGAGACCTTTTTGGAAAACATGGAAAAAGAAGAGGAACAAAGAGATGACCAAGAGGAAGATGAT
ATTGATTTTTTTGAAGATGTGGATTCCGATGAAGATGAAGGAGGACTGTTTGGAGGCCAGGATCTTAAGTCAGGTAAAAG
TTCCAGAAACCTGAAATACAAAGATTTCTTTGATCCAGTTGAAAGTGATGAAGACGTAGCAAGTGTCCAGGATGATGGGA
ATGAACTGGCTTCAAATGAAGAGGAAGAGATTGCTGAAGGAGAAGAAAGCATTTCTGAGACGGATGAAGATGATGACCTT
GAAGAAAGTGGAGACAGTAAACAACATAAAGAAACCTTGAAAAGAGTGACCTTTGCTCTGCCCAATGATGAGGACACTGA
AGATACAAATATCTTAAATGTACAGAAAGACTCTGATGAAGTCAAATCCTCTTTTGAAAAAAGACAAGAAAAGATGAATG
AAAAAATTGCATCTTTGGAAAAAGAGTTGTTGGAGAAGAAACCTTGGCAGCTTCAAGGAGAAGTGACAGCGCAGAAGCGG
CCCGAGAACAGCCTCCTGGAAGAGACCCTGCACTTCGACCACGCCGTGCGCATGGCACCTGTGATCACAGAGGAAACCAC
TCTCCAACTAGAGGATATCATTAAGCAGAGGATAAAAGATCAGGCTTGGGATGATGTCGTACGCAAAGAAAAGCCTAAAG
AGGATGCATTTGAGTATAAAAAGCGTTTAACACTGGACCACGAAAAGAGTAAATTGAGCCTTGCTGAAATTTACGAACAG
GAGTACATCAAACTCAACCAGCAAAAAACAGCAGAGGAAGAAAATCCAGAGCATGTAGAAATCCAGAAGATGATGGACTC
CCTCTTCTTAAAGTTGGATGCGCTCTCAAACTTCCACTTCATCCCCAAGCCACCTGTTCCAGAAATTAAAGTGGTATCAA
ATCTGCCTGCTGTCACCATGGAGGAGGTTGCCCCCGTGAGTGTCAGTGACGCAGCCCTCCTGGCCCCAGAGGAGGTCAAG
GAGAAAAATAAAGCTGGAGATATAAAAACAGCTGCTGAGAAAACAGCTACAGACAAGAAACGAGAAAGGAGGAAAAAGAA
ATATCAAAAGCATTTGAAAATAAAGGAGAAAGAAAAGCGGAGAAGACTTCTTGAAAAGAATAACCCAGACCAGGCAGGGA
GATACACCAAAGCAGTAGCCTCTGAGAAGCTGAAACAGCTGACCAAGACAGGAAAAGCCTCTCTGCTCAAGGATGAAGGT
AAAGACAAAGCCTTAAAATCATCTCAGGCATTCTTTTCTAAATTACAAGATCAAGTGAAAATGCAAATCAGCAATGCAAA
GAAAACCGAGAAGAAAAAGAAGAAAAACCAGGATATATCGGTTCATAAATTAAAGCTGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 9 .96 RPM |
| SRP017611_kidney | 16 .66 RPM |
| SRP017611_liver | 13 .21 RPM |
| ERP005899_muscle | 11 .51 RPM |
| ERP005899_liver | 17 .95 RPM |
| SRP030211_testis | 36 .18 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Echinops telfairi | ENSETEG00000016641 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000003177 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_1333 | 93.78 | 84.26 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000009854 retrocopies