Parental gene: | EIF3L, ENSCAFG00000001443 |
| Aliases: | EIF3L, EIF3EIP, EIF3S6IP |
| Description: | Canis lupus familiaris eukaryotic translation initiation factor 3, subunit L (EIF3L), mRNA. [Source:RefSeq mRNA;Acc:NM_001251940] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 10:26757638..26784908(-) |
>ENSCAFG00000001443
ATGTCTTACCCCGCTGATGATTACGAGTCCGAGGCTGCTTATGATCCCTATGCTTACCCAGGCGACTATGATATGCACAC
AGGAGACCCAAAGCAGGATCTGGCTTACGAACGTCAGTATGAACAGCAGACCTATCAGGTGATCCCCGAAGTGATCAAAA
ACTTCATCCAGTATTTTCACAAAACCGTCTCGGATTTGATTGACCAGAAGGTGTATGAGCTGCAGGCTAGTCGTGTATCC
AGCGATGTCATTGATCAGAAAGTATATGAGATCCAGGACATCTATGAGAACAGCTGGACCAAGTTGACTGAAAGGTTCTT
CAAGAATACACCTTGGCCTGAGGCTGAAGCCATAGCTCCACAGGTTGGCAACGATGCCGTCTTCCTGATTTTGTACAAAG
AATTATACTACAGGCACATATATGCCAAAGTCAGTGGGGGCCCCTCCTTGGAGCAGAGGTTTGAATCCTACTACAACTAC
TGCAATCTCTTCAACTACATTCTTAATGCTGATGGTCCTGCTCCCCTTGAACTACCTAACCAGTGGCTTTGGGATATCAT
TGATGAGTTCATCTATCAGTTTCAGTCATTCAGTCAGTACCGCTGTAAGACTGCCAAGAAGTCAGAGGAAGAGATTGACT
TCCTTCGCTCCAATCCCAAAATCTGGAATGTTCACAGTGTCCTCAATGTCCTCCACTCCCTGGTCGACAAATCCAACATT
AACCGGCAATTGGAGGTGTACACAAGTGGTGGTGACCCCGAGAGTGTGGCTGGCGAGTATGGACGGCACTCCCTTTACAA
GATGCTTGGGTATTTCAGCCTGGTGGGGCTTCTGCGTCTGCACTCCCTTTTAGGGGATTACTACCAGGCCATCAAGGTGC
TGGAGAATATTGAACTGAATAAGAAGAGTATGTATTCTCGTGTGCCTGAGTGTCAGGTCACCACATACTACTATGTCGGT
TTTGCATATTTGATGATGCGTCGCTACCAGGATGCCATCCGGGTATTTGCCAATATCCTCCTCTACATCCAAAGGACCAA
GAGCATGTTCCAAAGGACTACATACAAGTATGAGATGATTAACAAGCAAAATGAGCAGATGCACGCGCTGCTGGCCATCG
CCCTCACCATGTACCCCATGCGAATCGATGAGAGCATTCACCTGCAGCTGCGGGAGAAATACGGGGATAAGATGCTACGC
ATGCAGAAGGGTGACCCACAGGTCTATGAGGAACTTTTCAGTTACTCGTGCCCCAAATTCCTGTCACCTGTGGTGCCCAA
CTATGATAATGTGCACCCCAACTACCACAAGGAGCCCTTCCTGCAGCAGCTGAAGGTGTTTTCTGATGAAGTGCAGCAGC
AGGCCCAGCTCTCCACCATCCGTAGCTTCCTCAAGCTGTACACTACCATGCCTGTGGCCAAGCTGGCCGGCTTCCTGGAC
CTCACAGAGCAGGAGTTCAGGATCCAGCTCCTTGTCTTCAAGCATAAGATGAAGAACCTAGTGTGGACCAGTGGCATCTC
TGCCCTTGACGGTGAATTTCAGTCGGCATCCGAAGTTGACTTCTACATTGATAAGGACATGATCCACATTGCAGACACCA
AGGTCGCCAGGCGCTATGGGGATTTCTTCATCCGGCAGATTCACAAATTTGAGGAGCTCAATCGAACTCTGAAGAAGATG
GGACAGAGACCCTGA
ATGTCTTACCCCGCTGATGATTACGAGTCCGAGGCTGCTTATGATCCCTATGCTTACCCAGGCGACTATGATATGCACAC
AGGAGACCCAAAGCAGGATCTGGCTTACGAACGTCAGTATGAACAGCAGACCTATCAGGTGATCCCCGAAGTGATCAAAA
ACTTCATCCAGTATTTTCACAAAACCGTCTCGGATTTGATTGACCAGAAGGTGTATGAGCTGCAGGCTAGTCGTGTATCC
AGCGATGTCATTGATCAGAAAGTATATGAGATCCAGGACATCTATGAGAACAGCTGGACCAAGTTGACTGAAAGGTTCTT
CAAGAATACACCTTGGCCTGAGGCTGAAGCCATAGCTCCACAGGTTGGCAACGATGCCGTCTTCCTGATTTTGTACAAAG
AATTATACTACAGGCACATATATGCCAAAGTCAGTGGGGGCCCCTCCTTGGAGCAGAGGTTTGAATCCTACTACAACTAC
TGCAATCTCTTCAACTACATTCTTAATGCTGATGGTCCTGCTCCCCTTGAACTACCTAACCAGTGGCTTTGGGATATCAT
TGATGAGTTCATCTATCAGTTTCAGTCATTCAGTCAGTACCGCTGTAAGACTGCCAAGAAGTCAGAGGAAGAGATTGACT
TCCTTCGCTCCAATCCCAAAATCTGGAATGTTCACAGTGTCCTCAATGTCCTCCACTCCCTGGTCGACAAATCCAACATT
AACCGGCAATTGGAGGTGTACACAAGTGGTGGTGACCCCGAGAGTGTGGCTGGCGAGTATGGACGGCACTCCCTTTACAA
GATGCTTGGGTATTTCAGCCTGGTGGGGCTTCTGCGTCTGCACTCCCTTTTAGGGGATTACTACCAGGCCATCAAGGTGC
TGGAGAATATTGAACTGAATAAGAAGAGTATGTATTCTCGTGTGCCTGAGTGTCAGGTCACCACATACTACTATGTCGGT
TTTGCATATTTGATGATGCGTCGCTACCAGGATGCCATCCGGGTATTTGCCAATATCCTCCTCTACATCCAAAGGACCAA
GAGCATGTTCCAAAGGACTACATACAAGTATGAGATGATTAACAAGCAAAATGAGCAGATGCACGCGCTGCTGGCCATCG
CCCTCACCATGTACCCCATGCGAATCGATGAGAGCATTCACCTGCAGCTGCGGGAGAAATACGGGGATAAGATGCTACGC
ATGCAGAAGGGTGACCCACAGGTCTATGAGGAACTTTTCAGTTACTCGTGCCCCAAATTCCTGTCACCTGTGGTGCCCAA
CTATGATAATGTGCACCCCAACTACCACAAGGAGCCCTTCCTGCAGCAGCTGAAGGTGTTTTCTGATGAAGTGCAGCAGC
AGGCCCAGCTCTCCACCATCCGTAGCTTCCTCAAGCTGTACACTACCATGCCTGTGGCCAAGCTGGCCGGCTTCCTGGAC
CTCACAGAGCAGGAGTTCAGGATCCAGCTCCTTGTCTTCAAGCATAAGATGAAGAACCTAGTGTGGACCAGTGGCATCTC
TGCCCTTGACGGTGAATTTCAGTCGGCATCCGAAGTTGACTTCTACATTGATAAGGACATGATCCACATTGCAGACACCA
AGGTCGCCAGGCGCTATGGGGATTTCTTCATCCGGCAGATTCACAAATTTGAGGAGCTCAATCGAACTCTGAAGAAGATG
GGACAGAGACCCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 10 .00 RPM |
| SRP017611_kidney | 105 .92 RPM |
| SRP017611_liver | 24 .22 RPM |
| SRP012049_cerebellum | 25 .41 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Monodelphis domestica | ENSMODG00000019068 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000029444 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000011806 | ortholog_one2one | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000010103 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_315 | 96.99 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cfam_1496 | 98.58 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cfam_1877 | 99.82 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000001443 retrocopies