Parental gene:

C6ORF57, ENSCAFG00000002602

Aliases:None
Description:None
Organism:Dog (Canis familiaris)
Coordinates:12:33068947..33089657(+)


>ENSCAFG00000002602
ATGACTGTGTCGAGGCTGGCTCGTTTGCTTGGCTGCGTCCCGGCCACCGCGTGGAGAGCGGCTAGATCACCCCTTCTGTG
TCATTCTGTGAGGAAAATGAGTTCTCAAGGAGAAAAATCCAAACCTATTCAACAATCTCTTAAGAAGCCAAAGTTACCAG
AAGGTCGTTTTGATGCACCAGAAGATTCTAATTTAGAGAAAGAACCACTGACAAAATTTCCAGATGATATTAATCCTGTT
ACCAAAGAAAAAGGTGGACCCAGAGGCCCAGAACCTACCCGATATGGAGATTGGGAACGAAAAGGACGCTGTATTGATTT
TTAA

Library Parental gene expression (RPM)
SRP017611_brain 6 .75 RPM
SRP017611_kidney 20 .54 RPM
SRP017611_liver 3 .63 RPM
SRP012049_cerebellum 10 .84 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000011410 ortholog_one2one 6 retrogenes
retro_chof_176, retro_chof_1854, retro_chof_252, retro_chof_465, retro_chof_694, retro_chof_966,
Erinaceus europaeus ENSEEUG00000011260 ortholog_one2one 1 retrogene
retro_eeur_539,
Echinops telfairi ENSETEG00000011154 ortholog_one2one 1 retrogene
retro_etel_1362,
Felis catus ENSFCAG00000026799 ortholog_one2one 1 retrogene
retro_fcat_986,
Rattus norvegicus ENSRNOG00000028087 ortholog_one2one 1 retrogene
retro_rnor_1514,
Tupaia belangeri ENSTBEG00000004344 ortholog_one2one 2 retrogenes
retro_tbel_3788, retro_tbel_4408,
Tarsius syrichta ENSTSYG00000001769 ortholog_one2one 1 retrogene
retro_tsyr_67,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_268 80.56 100.00
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2. retro_cfam_657 68.52 100.00
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Download FASTA sequences of all ENSCAFG00000002602 retrocopies