Parental gene:

C6orf57, ENSEEUG00000011260

Aliases:None
Description:chromosome 6 open reading frame 57 [Source:HGNC Symbol;Acc:20957]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_5402:8657..84504(+)


>ENSEEUG00000011260
ATGACCCTGTCGCTGCTACCGCGCTTGTTTGGCCGCGTCCCTGCCGTGGCGCGAAGAGTGACAAGATCACCCCTTCTGTG
TCATTCTTTGAGGAAAATGAATTATAAGGGAGGAAAATCTGAACACTTTAAGCAATCCCTTGAGAAGCCAAAGTTACCAG
AAGGCCATTTTGATGTACTAGAAGATTCCAATTTAGAGAAAGAACCACTGACAAAATTTCCAGATGATGTTAATCCTGTC
ACCAAAGAAAAAGGTGGACCCAGAGGCCCAGAACCTACCAGATATGGAGATTGGGAACGCAAAGGACGATGTATTGATTT
TTAA

Library Parental gene expression (RPM)
SRP017611_liver 3 .05 RPM
SRP017611_kidney 4 .13 RPM
SRP017611_brain 3 .87 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000002602 ortholog_one2one 2 retrogenes
retro_cfam_268, retro_cfam_657,
Choloepus hoffmanni ENSCHOG00000011410 ortholog_one2one 6 retrogenes
retro_chof_176, retro_chof_1854, retro_chof_252, retro_chof_465, retro_chof_694, retro_chof_966,
Echinops telfairi ENSETEG00000011154 ortholog_one2one 1 retrogene
retro_etel_1362,
Felis catus ENSFCAG00000026799 ortholog_one2one 1 retrogene
retro_fcat_986,
Rattus norvegicus ENSRNOG00000028087 ortholog_one2one 1 retrogene
retro_rnor_1514,
Tupaia belangeri ENSTBEG00000004344 ortholog_one2one 2 retrogenes
retro_tbel_3788, retro_tbel_4408,
Tarsius syrichta ENSTSYG00000001769 ortholog_one2one 1 retrogene
retro_tsyr_67,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_539 61.86 89.72
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSEEUG00000011260 retrocopies