Parental gene:

THRAP3, ENSCAFG00000003389

Aliases:None
Description:thyroid hormone receptor associated protein 3 [Source:HGNC Symbol;Acc:22964]
Organism:Dog (Canis familiaris)
Coordinates:15:5951926..6022513(-)


>ENSCAFG00000003389
ATGTCAAAAACAAACAAATCCAAGTCTGGATCTCGATCTTCTCGCTCAAGATCTGCATCAAGGTCTCGTTCTCGTTCATT
TTCGAAGTCTCGGTCCCGAAGTCGATCTGTCTCTCGTTCAAGGAAGCGCAGGCTGAGTTCTAGGTCTCGTTCCAGATCAT
ATTCTCCAGCTCATAACAGAGAGAGAAATCACCCAAGAGTATATCAGAATCGGGATTTCCGAGGTCACAACAGAGGCTAC
AGAAGGCCCTATTATTTCCGTGGGCGCAACAGAGGCTTTTATCCGTGGGGCCAGTATAACCGAGGTGGCTATGGAAACTA
CCGCTCAAATTGGCAGAATTACCGGCAAGCATACAGTCCTCGTCGGGGCCGTTCCCGATCCCGGTCCCCAAAGAGAAGGT
CCCCTTCACCAAGGTCCAGGAGCCATTCTAGAAACTCCGATAAGTCTTCCTCTGACAGGTCAAGGCGCTCCTCATCCTCT
CGTTCTTCCTCCAACCACAGCCGAGTGGAATCTTCTAAGCGCAAGTCTGCAAAGGAGAAAAAGTCCTCTTCCAAGGATAG
CCGGCCATCTCAGGCTGCCGGGGATAACCAAGGTGATGAGGCCAAGGAGCAGACGTTCTCTGGAGGCACCTCTCAAGATA
CAAAAGCATCTGACAGCTCGAAACCATGGCCAGATGCCACCACTTACAGTGCTGGTTCTGCATCACGGGCCTCTGCAGTT
TCTGAGTTGAGTCCCCGGGAGCGAAGCCCTGCTCTCAAAAGCCCACTCCAGTCTGTGGTGGTGAGGCGGCGCTCACCCCG
TCCTAGCCCTGTGCCAAAACCTAGCCCGCCACTTTCCAACACATCCCAGATGGGCTCAACTCTGCAGAGTGGTGCTGGGT
ACCAGGCTGGAACACACCAAAGTCCATTCGATCATGGCTCTGGGTCCTTGAGTCCATCCAAAAAGAGCCCTGTGGGTAAG
AGTCCACCGGCCACTGGCTCCACGTATGGCTCGTCTCAGAAGGAGGAGTCTACTGCTCCAGGAGGAGCAGCCTATACAAA
AAGGTACCTAGAAGAACAGAAGACAGAGAATGGAAAAGATAAGGAGCAGAAACAAACCAATACCGATAAAGAGAAAATGA
AAGAGAAAGGGAGCTTCTCTGATACAGGCTTGGGTGATACAAAAATGAAATCTGATCCATTTGCTCCCAAAACTGATACC
GAGAAGTCTTTTCGGGGTAGCCAGTCTCCCAAAAGGTATAAGCTTCGAGATGACTTTGAGAAGAAGATGGCCGACTTCCA
TAAGGACGACATGGATGATCAAGATAAGGACAAAGCTAAGGGAAGGAAGGAATCGGAGTTTGATGATGAACCCAAATTTA
TGTCGAAAGTCATAGCAGGTGCAAACAAAAACCAGGAGGAGGAGAAGTCAGGCAAATGGGAGGGCCTGGTGTATGCGCCA
CCAGGGAAGGAAAAGCAGAGGAAAACAGAGGAGCTGGAGGAGGAATCTTTCTCTGAGAGATCCAAAAAGGAGGATCGGGG
AGGGCCCAAGAGAACCGAAAGTGGGCACAGAGGGTTCGTGCCTGAAAAGAATTTCCGAGTGACCGCTTACAAAGCAGTCC
AGGAGAAAAGCTCGTCACCTCCCCTGAGAAAGACCTCTGAAAGCCGAGAGAAGCTAGGAGCCAAGGGAGACTTTTCCACA
GGGAAGTCTTCCTTTTCCATTACTCGAGAGGCCCAGGTCAATGTCCGGATGGACTCTTTTGATGAGGACCTTGCAAGACC
AAGTGGCTTATTGGCTCAGGAACGCAAGCTTTGTCGAGACCTAGTCCATAGCAACAAAAAGGAACAGGAATTTCGTTCCA
TTTTCCAGCACATACAGTCAGCTCAGTCTCAGCGGAGCCCCTCTGAACTGTTTGCCCAGCATATAGTGACCATTGTTCAC
CACGTAAAAGAGCATCACTTTGGGTCCTCAGGAATGACATTGCATGAGCGCTTTACTAAATACCTAAAGAGAGGAACTGA
GCAGGAGGCAGCTAAAAACAAGAAAAGCCCAGAGATACACAGGAGGATAGACATTTCTCCCAGTACATTCAGAAAACATG
GTTTGGCTCATGATGAAATGAAAAGTCCACGGGAACCTGGCTACAAGGCTGAGGGAAAATACAAAGATGATCCTGTTGAT
CTCCGCCTTGATATTGAACGTCGTAAAAAACATAAGGAGAGAGATCTTAAACGAGGTAAATCAAGAGAATCAGTGGATTC
CCGAGACTCAAGCCACTCAAGGGAAAGATCAGCTGAGAAAACAGAGAAAACTCACAAAGGATCAAAGAAGCAGAAGAAGC
ACCGGAGGGCACGAGACCGGTCCAGATCATCCTCCTCTTCCTCCCAGTCGTCCCACTCCTACAAAGCGGAAGAGTACACT
GAAGAGACGGAGGAGAGGGAAGAGAGCAGCACAGGCTTTGACAAGTCAAGACTAGGGACCAAGGACTTCGTGGGTCCAAA
TGAAAGAGGCGGCAGGGCTCGAGGGACCTTTCAATTTCGAGCCAGAGGGAGAGGCTGGGGCAGAGGCACCTACTCTGGTA
ACAACAACAACAACAGCAACAACGATTTTCAAAAGAGAAACCGGGAGGAGGAGTGGGACCCTGAGTACACACCCAAGAGC
AAGAAGTATTACCTGCATGATGACCGCGAAGGTGAAGGCAGCGAGAAGTGGGTGAGCCGGGGCCGGGGCCGAGGAGCCTT
CCCCCGGGGTCGCGGCCGGTTCATGTTCCGGAAGTCCAGCACCAGCCCCAAATGGGCCCACGACAAGTTTAGTGGGGAGG
AAGGGGAGATTGAAGACGACGAGAGTGGGACAGAGAACCGAGAAGAGAAGGACAATTTACAGCCCGCAACTGAGTAG

Library Parental gene expression (RPM)
SRP012049_cerebellum 189 .71 RPM
SRP017611_brain 117 .98 RPM
SRP017611_kidney 83 .87 RPM
SRP017611_liver 78 .10 RPM



Species Parental gene accession Homology type Retrogenes number
Microcebus murinus ENSMICG00000007920 ortholog_one2one 1 retrogene
retro_mmur_671,
Mus musculus ENSMUSG00000043962 ortholog_one2one 1 retrogene
retro_mmus_2939,
Pongo abelii ENSPPYG00000001544 ortholog_one2one 1 retrogene
retro_pabe_2336,
Pan troglodytes ENSPTRG00000000535 ortholog_one2one 1 retrogene
retro_ptro_1771,
Rattus norvegicus ENSRNOG00000009977 ortholog_one2many 1 retrogene
retro_rnor_674,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_549 85.46 63.99
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Download FASTA sequences of all ENSCAFG00000003389 retrocopies