Parental gene:

Thrap3, ENSRNOG00000009977

Aliases:None
Description:Thyroid hormone receptor-associated protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q5M7V8]
Organism:Rat (Rattus norvegicus)
Coordinates:5:147947768..147989301(-)


>ENSRNOG00000009977
ATGTCAAAAACAAACAAATCCAAGTCTGGGTCTCGCTCTTCTCGGTCAAGATCAGCATCCAGATCTCGGTCTCGTTCGTT
TTCAAAGTCTCGATCCCGAAGCCGATCTGTCTCTCGTTCAAGGAAGCGCAGGCTGAGTTCTAGGTCTCGTTCCAGATCAT
ACTCTCCAGCTCATAACAGAGAAAGGAATCACCCCAGAGTATATCAGAATCGAGATTTCCGAGGTCACAACAGAGGCTAC
AGAAGGCCCTATTACTTCCGTGGACGAAACCGAGGCTTTTATCCATGGGGCCAGTATAACCGAGGTGGCTATGGAAATTA
CCGTTCTAATTGGCAGAACTACCGGCAAGCATACAGCCCTCGTCGGGGCCGATCCCGATCTCGGTCCCCCAAGAGAAGGT
CCCCTTCACCAAGGTCCAGGAGCCATTCTAGGAACTCGGATAAGTCATCCTCTGACAGGTCAAGACGTTCTTCGTCCTCC
CGGTCGTCCTCCAACCACAGCAGAGTTGAATCATCTAAACGAAAGTCTACAAAAGAGAAAAAGTCCTCTTCCAAGGATAG
CCGGCCATCTCAGGCAGCTGGTGATAACCAGGGAGATGAGGCTAAGGAGCAGACATTTTCTGGAGGCACCTCTCAAGATA
TAAAAGGGTCTGAGAGCTCAAAGCCATGGCCAGATGCTACCACCTATGGCACTGGTTCTGCATCACGGGCCTCGGTTTCT
GATCTGAGTCCCCGGGAGAGAAGCCCAGCTCTCAAAAGCCCCCTCCAGTCTGTGGTGGTTAGGCGAAGGTCACCACGCCC
TAGCCCTGTGCCCAAACCTAGTCCTCCTCTTTCTAATGCATCCCAGATGGGCTCATCTATGTCAGGCGGTGCTGGATATC
AGTCTGGAGCACACCAAGGTCCGTTTGACCATGGCTCTGGGTCTTTGAGTCCATCCAAAAAGAGCCCTGTGGGTAAGAGT
CCACCAGCCACTGGCTCTGCATATGGTTCATCTCAGAAAGAGGAGAGCGCTGCTTCGGGAGGAGCAGCCTACACAAAAAG
GTATCTGGAAGAGCAGAAGACGGAGAATGGGAAGGATAAGGAGCAGAAACAAACAAATACTGATAAAGAGAAGCTGAAGG
AGAAAGGGGGCTTCTCTGATGCTGATGTCAAAATGAAATCTGATCCATTTGCTCCCAAGACGGACACTGAGAAGCCCTTC
CGAGGCAGCCAGTCACCCAAAAGGTATAAGCTCCGGGATGACTTTGAGAAAAAGATGGCTGACTTCCACAAGGAGGAGAT
GGATGAACAAGATAAGGACAAATGTAAGGGAAGGAAGGAACCTGAGTTTGATGATGAGCCCAAATTTATATCTAAAGTCA
TAGCCGGTGCAAGCAAAAACCAGGAGGAAGAGAAGTCAGGCAAGTGGGAGAGCCTGCATGCAGGGAAGGAAAAGCAGAGG
AAAGCAGAGGAGCTGGAGGAGGAGCCTTTCACAGAGAGATCCCGAAAGGAGGAACGTGGAGGGTCCAAGAGGAGCGAAAG
TGGGCACAGGGGCTTTGTGCCAGAAAAGAATTTCCGGGTGACTGCATACAAGGCGGTCCAGGAGAAAAGTTCATCGCCTC
CCCCAAGGAAGACCTCTGAGAGCCGTGACAAGCTGGGAAACAAAGGAGACTTTTCCTCAGGGAAGTCTTCCTTTTCCATT
ACTCGGGAGGCCCAGGTCAATGTCCGGATGGACTCCTTCGATGAGGACCTTGCACGACCCAGTGGCTTATTGGCTCAGGA
ACGAAAGCTTTGTCGGGATCTAGTCCATAGCAACAAAAAGGAGCAGGAATTCCGTTCCATTTTCCAGCACATACAGTCAG
CTCAGTCGCAGCGTAGCCCCTCAGAATTGTTTGCCCAGCACATAGTGACCATTGTTCATCATGTTAAAGAGCATCACTTT
GGATCCTCTGGAATGACATTGCATGAGCGCTTTACTAAATACCTAAAGAGAGGGAATGAACAAGAAGCAGCTAAAACTAA
GAAAAGCCCAGAGATACACAGGAGGATAGACATTTCCCCCAGTACATTCAGAAAGCATGGTTTGACTCATGAGGAATTGA
AAAGTCCACGGGAACCTGGCTACAAGGCTGAAGGAAAGTACAAAGATGATCCTGTTGATCTTCGCCTTGATATTGAACGC
CGTAAAAAACATAAGGAGAGAGATCTTAAGCGAGGTAAATCAAGAGAGTCGGTGGATTCCAGAGACTCTAGCCACTCAAG
AGAAAGATCAACTGAAAAGACAGAGAAAACCCACAAAGGATCAAAGAAGCAGAAGAAGCACCGCAGAGCAAGAGACCGGT
CTAGGTCCTCCTCGTCCTCTTCCCAGTCATCTCACTCCTACAAAGCAGAGGAGTACCCTGAGGAAGCAGAGGACAGGGAG
GAGAGCACCACAGGTTTTGACAAATCCAGATTGGGGACCAAAGACTTTGTGGGTCCGAATGAAAGAGGCGGCAGAGCTCG
GGGAACCTTCCAATTTCGAGCAAGAGGGAGAGGTTGGGGCAGAGGAAACTATTCTGGTAACAATAACAACAACAGCAACA
ATGATTTCCAAAAGAGAAGCCGGGAAGAAGAATGGGATCCCGAGTACACACCCAAGAGCAAGAAGTATTACTTGCATGAC
GACCGGGAAGGCGAGGGCAGCGACAAGTGGATGAGCCGAGGCCGCGGCCGAGGAGCCTTCCCCCGGGGGCGGGGCCGGTT
CATGTTCAGGAAATCCAGTACCAGCCCCAAGTGGGCCCATGACAAGTTCAGTGGGGAGGAGGGGGAGATTGAAGACGATG
AGAGTGGGACAGAGAACAGAGAAGAAAAGGACAGTTTACAACCTTCAGCTGAGTAG

Library Parental gene expression (RPM)
SRP017611_brain 107 .34 RPM
SRP017611_kidney 118 .49 RPM
SRP017611_liver 77 .46 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000003389 ortholog_one2many 1 retrogene
retro_cfam_549,
Microcebus murinus ENSMICG00000007920 ortholog_one2one 1 retrogene
retro_mmur_671,
Mus musculus ENSMUSG00000043962 ortholog_one2one 1 retrogene
retro_mmus_2939,
Pongo abelii ENSPPYG00000001544 possible_ortholog 1 retrogene
retro_pabe_2336,
Pan troglodytes ENSPTRG00000000535 ortholog_one2one 1 retrogene
retro_ptro_1771,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_674 76.02 64.14
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Download FASTA sequences of all ENSRNOG00000009977 retrocopies