Parental gene: | Thrap3, ENSMUSG00000043962 |
| Aliases: | Thrap3, 9330151F09Rik, B230333E16Rik, Trap150 |
| Description: | thyroid hormone receptor associated protein 3 [Source:MGI Symbol;Acc:MGI:2442637] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 4:126164081..126202760(-) |
>ENSMUSG00000043962
ATGTCAAAAACAAACAAATCCAAGTCTGGGTCTCGCTCTTCTCGCTCAAGATCTGCATCCAGATCTCGGTCTCGTTCGTT
TTCAAAGTCTCGGTCCCGAAGCCGATCTGTCTCTCGTTCAAGGAAGCGCAGGCTGAGTTCTAGGTCTCGTTCCAGATCAT
ATTCTCCAGCTCATAACAGAGAAAGGAATCACCCCAGAGTGTATCAGAATCGAGATTTCCGAGGTCATAACAGAGGCTAC
AGGAGGCCCTATTACTTCCGTGGGCGAAACCGAGGCTTTTATCCATGGGGCCAGTATAACCGAGGTGGCTATGGAAACTA
CCGTTCCAATTGGCAGAACTACCGGCAAGCATACAGCCCTCGTCGGGGCCGTTCTCGATCCCGGTCCCCAAAGAGAAGGT
CCCCTTCACCACGGTCCAGGAGCCATTCTAGGAACTCTGACAAGTCATCCTCTGACAGGTCAAGACGCTCCTCATCCTCC
CGGTCGTCCTCCAACCACAGCAGAGTTGAGTCGTCTAAGCGAAAGTCTACAAAAGAGAAAAAGTCCTCTTCCAAGGATAG
CCGGCCATCTCAGGCAGCTGGTGATAACCAGGGAGATGAGGCTAAGGAGCAGACATTCTCTGGAGGCACCTCTCAAGATA
TAAAAGGGTCTGAGAGCTCAAAGCCATGGCCAGATGCCACCACCTATGGCGCCGGTTCTGCATCACGGGCCTCGGTTTCT
GATCTGAGTCCCCGGGAGAGAAGCCCAGCTCTCAAAAGCCCCCTCCAGTCTGTGGTGGTTAGGCGCAGGTCACCACGCCC
TAGCCCTGTGCCAAAACCCAGTCCTCCACTTTCTAATGCGTCCCAGATGGGCTCGTCTATGTCAGGGGGTGCTGGGTATC
AGTCTGGAGCACACCAAGGCCAGTTCGACCATGGCTCTGGGTCTTTGAGTCCATCCAAAAAGAGCCCTGTGGGTAAGAGT
CCACCAGCTACTGGCTCTGCATATGGCTCATCTCAGAAAGAGGAGAGTGCTGCTTCGGGAGGGGCAGCATATTCAAAAAG
GTATCTGGAGGAGCAGAAGACTGAGAATGGGAAGGATAAGGAGCAGAAACAAACAAATGCCGATAAGGAGAAGCTGAAGG
AGAAAGGGGGCTTCTCTGATGCTGATGTCAAAATGAAATCTGATCCATTTGCTCCCAAGACGGACTCTGAGAAGCCCTTC
CGAGGCAGCCAGTCGCCCAAAAGGTATAAGCTTCGGGATGACTTTGAGAAAAAGATGGCTGACTTCCACAAGGAGGAGCT
GGATGAGCACGATAAGGACAAAAGTAAGGGAAGGAAGGAACCCGAGTTTGATGATGAGCCCAAATTTATGTCGAAAGTCA
TAGCCGGTGCAAGCAAAAACCAGGAGGAAGAGAAGTCAGGCAAGTGGGAGAGCCTGCACACAGGGAAGGAAAAGCAGAGG
AAGGCAGAGGAAATGGAGGATGAGCCTTTCACAGAGAGATCCCGAAAGGAGGAGCGTGGAGGGTCCAAGAGGAGTGAAAG
TGGGCACAGGGGCTTTGTGCCAGAAAAGAATTTCCGGGTGACTGCGTACAAGGCGGTCCAGGAGAAAAGTTCATCGCCGC
CCCCAAGGAAGACCTCTGAGAGCCGTGACAAGCTGGGAAGCAAAGGAGACTTTTCCTCAGGGAAGTCTTCCTTTTCCATT
ACCCGGGAGGCCCAAGTCAATGTCCGGATGGACTCCTTCGATGAGGACCTTGCACGACCTAGTGGTTTATTGGCTCAGGA
GCGAAAGCTCTGTCGGGATCTAGTCCATAGCAACAAAAAGGAGCAGGAGTTCCGTTCCATTTTCCAGCACATACAGTCGG
CTCAGTCTCAGCGTAGCCCCTCAGAACTGTTTGCTCAGCACATAGTGACCATTGTTCATCATGTTAAAGAGCATCACTTT
GGATCCTCTGGAATGACATTGCATGAACGCTTTACTAAATACCTAAAGAGAGGAAATGAACAAGAAGCAGCTAAAAATAA
GAAAAGCCCAGAGATACACAGGAGGATAGACATTTCCCCCAGTACATTCAGAAAGCATGGTTTGACTCATGAGGAATTGA
AAAGTCCACGGGAACCTGGCTACAAGGCTGAGGGAAAATACAAAGATGATCCTGTTGATCTTCGCCTTGATATTGAACGT
CGTAAAAAACATAAGGAGAGAGATCTTAAGCGAGGTAAATCAAGAGAGTCAGTGGATTCCAGAGACTCTAGCCACTCAAG
AGAAAGATCAACTGAAAAGACAGAGAAAACCCACAAAGGATCAAAGAAGCAGAAGAAGCACCGCAGAGCAAGAGACCGGT
CCAGGTCCTCCTCCTCCTCCTCCCAGTCCTCCCATTCCTACAAAGCAGAGGAGTACCCTGAGGAGGCAGAAGAGAGGGAG
GAGAGCACCTCAGGTTTCGACAAATCCAGATTGGGGACCAAAGACTTCGTGGGTCCGAATGAAAGAGGCGGCAGAGCTCG
GGGAACCTTTCAATTTCGTGCAAGAGGGAGAGGATGGGGCAGAGGAAACTATTCTGGTAACAATAACAACAACAGCAACA
ATGATTTTCAAAAGAGAAGCCGGGAAGAAGAGTGGGATCCAGAGTACACGCCCAAGAGCAAGAAGTATTACTTGCATGAC
GACCGGGAAGGCGAGGGCAGCGACAAGTGGATGGGCCGAGGCCGAGGCCGAGGAGCCTTTCCCCGGGGGCGGGGCCGGTT
CATGTTCCGGAAGTCCAGTACCAGCCCCAAGTGGGCCCATGACAAGTTCAGTGGGGAGGAGGGAGAGATAGAAGACGACG
AGAGTGGGACAGAGAACAGAGAAGAGAAGGACAGTTTACAGCCCTCAGCTGAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 58 .62 RPM |
| SRP007412_cerebellum | 81 .55 RPM |
| SRP007412_heart | 66 .74 RPM |
| SRP007412_kidney | 75 .15 RPM |
| SRP007412_liver | 55 .63 RPM |
| SRP007412_testis | 84 .53 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000003389 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000007920 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000000535 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000009977 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_2939 | 91.69 | 70.77 | Please wait, loading  |
Please wait, loading |
Please wait, loading |
Download FASTA sequences of all ENSMUSG00000043962 retrocopies