Parental gene:

THRAP3, ENSPTRG00000000535

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:1:36438921..36520057(+)


>ENSPTRG00000000535
ATGTCAAAAACAAACAAATCCAAGTCTGGATCTCGCTCTTCTCGCTCAAGATCTGCATCAAGATCTCGTTCTCGTTCATT
TTCGAAGTCTCGGTCCCGAAGCCGATCTCTGTCTCGTTCAAGGAAGCGCAGGCTGAGTTCTAGGTCTCGTTCCAGATCAT
ATTCTCCAGCTCATAACAGAGAAAGAAACCACCCAAGAGTATATCAGAATCGGGATTTCCGAGGTCACAACAGAGGCTAT
AGAAGGCCCTATTATTTCCGTGGGCGTAACAGAGGCTTTTATCCATGGGGCCAATATAACCGAGGAGGCTATGGAAACTA
CCGCTCAAATTGGCAGAATTACCGGCAAGCATACAGTCCTCGTCGAGGCCGTTCAAGATCCCGGTCCCCAAAGAGAAGGT
CCCCTTCACCAAGGTCCAGGAGCCATTCTAGAAACTCTGATAAGTCGTCTTCTGACCGGTCAAGGCGCTCCTCATCCTCC
CGTTCTTCCTCCAACCATAGCCGAGTTGAATCTTCTAAGCGCAAGTCTGCAAAGGAGAAAAAGTCCTCTTCTAAGGATAG
CCGGCCATCTCAGGCTGCCGGGGATAACCAGGGAGATGAGGCCAAGGAGCAGACATTCTCTGGAGGCACCTCTCAAGATA
CAAAAGCATCTGAGAGCTCGAAGCCGTGGCCAGATGCCACCTACGGCACTGGTTCTGCATCACGGGCCTCAGCAGTTTCT
GAGCTGAGTCCTCGGGAGCGAAGCCCAGCTCTCAAAAGCCCCCTCCAGTCTGTGGTGGTGAGGCGGCGGTCACCCCGTCC
TAGCCCCGTGCCAAAACCTAGTCCTCCACTTTCCAGCACATCCCAGATGGGCTCAACTCTGCCGAGTGGTGCTGGGTATC
AGTCTGGGACACACCAAGGTCAGTTCGACCATGGTTCTGGGTCCCTGAGTCCATCCAAAAAGAGCCCTGTGGGTAAGAGT
CCACCATCCACTGGCTCCACATATGGCTCATCTCAGAAGGAGGAGAGTGCTGCTTCAGGAGGAGCAGCCTATACAAAGAG
GTATCTAGAAGAGCAGAAGACAGAGAATGGAAAAGATAAGGAACAGAAACAAACAAATACCGATAAAGAAAAAATAAAAG
AGAAAGGGAGCTTCTCTGACACAGGCTTGGGTGATGGAAAAATGAAATCTGATTCTTTTGCTCCCAAAACTGATTCTGAG
AAGCCTTTTCGGGGCAGTCAGTCTCCCAAAAGGTATAAGCTCCGAGATGACTTTGAGAAGAAGATGGCTGACTTCCACAA
GGAGGAGATGGATGATCAAGATAAGGACAAAGCTAAGGGAAGGAAGGAATCTGAGTTTGATGATGAACCCAAATTTATGT
CTAAAGTCATAGGTGCAAACAAAAACCAGGAGGAGGAGAAGTCAGGCAAATGGGAGGGCCTGGTATATGCACCTCCAGGG
AAGGAAAAGCAGAGAAAAACAGAGGAGCTGGAGGAGGAGTCTTTCCCAGAGAGATCCAAAAAGGAAGATCGGGGCAAGAG
AAGCGAAGGTGGGCACAGGGGCTTTGTGCCTGAGAAGAATTTCCGAGTGACTGCTTATAAAGCAGTCCAGGAGAAAAGCT
CCTCACCTCCCCCAAGAAAGACCTCTGAGAGCCGAGACAAGCTGGGAGCGAAAGGAGATTTTCCCACAGGAAAGTCTTCC
TTTTCCATTACTCGAGAGGCACAGGTCAATGTCCGGATGGACTCTTTTGATGAGGACCTTGCACGACCCAGTGGCTTATT
GGCTCAGGAACGTAAGCTTTGCCGAGATCTAGTCCATAGCAACAAAAAGGAACAGGAGTTTCGTTCCATTTTCCAGCACA
TACAATCAGCTCAGTCTCAGCGTAGCCCCTCAGAACTGTTTGCCCAACATATAGTGACCATTGTTCACCATGTTAAAGAG
CATCACTTTGGGTCCTCAGGAATGACATTACATGAACGCTTTACTAAATACCTAAAGAGAGGAACTGAGCAGGAGGCAGC
CAAAAACAAGAAAAGCCCAGAGATACACAGGAGAATAGACATTTCCCCCAGTACATTCAGAAAACATGGTTTGGCTCATG
ATGAAATGAAAAGTCCCCGGGAACCTGGCTACAAGGCTGAGGGAAAATACAAAGATGATCCTGTTGATCTCCGCCTTGAT
ATTGAACGTCGTAAAAAACATAAGGAGAGAGATCTTAAACGAGGTAAATCGAGAGAATCAGTGGATTCCCGAGACTCCAG
CCACTCAAGGGAAAGGTCAGCTGAAAAAACAGAGAAAACTCATAAAGGATCAAAGAAACAGAAGAAGCATCGGAGAGCAA
GAGACAGGTCCAGATCCTCCTCCTCTTCCTCCCAGTCATCTCACTCCTACAAAGCAGAAGAGTACACTGAAGAGACAGAG
GAAAGAGAGGAGAGCACCACGGGCTTTGACAAATCAAGACTGGGGACCAAAGACTTTGTGGGTCCAAGTGAAAGAGGAGG
TGGCAGAGCTCGAGGAACCTTTCAGTTTCGAGCCAGAGGAAGAGGCTGGGGCAGAGGCAACTACTCTGGGAACAATAACA
ACAACAGCAACAACGATTTTCAAAAAAGAAACCGGGAAGAGGAGTGGGACCCAGAGTACACACCCAAAAGCAAGAAGTAT
TACTTGCATGATGACCGTGAAGGTGAAGGCAGTGACAAGTGGGTGAGCCGGGGCCGGGGCCGAGGAGCCTTTCCTCGCGG
TCGGGGCCGGTTCATGTTCCGGAAATCAAGTACCAGCCCCAAGTGGGCCCATGACAAGTTCAGTGGGGAGGAAGGGGAGA
TTGAAGACGACGAGAGTGGGACAGAGAACCGAGAAGAGAAGGACAATATACAGCCCACAACCGAGTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 75 .70 RPM
SRP007412_cerebellum 140 .02 RPM
SRP007412_heart 107 .20 RPM
SRP007412_kidney 120 .12 RPM
SRP007412_liver 114 .90 RPM
SRP007412_testis 124 .25 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000003389 ortholog_one2one 1 retrogene
retro_cfam_549,
Microcebus murinus ENSMICG00000007920 ortholog_one2one 1 retrogene
retro_mmur_671,
Mus musculus ENSMUSG00000043962 ortholog_one2one 1 retrogene
retro_mmus_2939,
Pan troglodytes ENSPTRG00000018635 within_species_paralog 1 retrogene
retro_ptro_2287,
Rattus norvegicus ENSRNOG00000009977 ortholog_one2one 1 retrogene
retro_rnor_674,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1771 87.95 71.41
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Download FASTA sequences of all ENSPTRG00000000535 retrocopies