Parental gene:

PTOV1, ENSCAFG00000003495

Aliases:None
Description:prostate tumor overexpressed 1 [Source:HGNC Symbol;Acc:9632]
Organism:Dog (Canis familiaris)
Coordinates:1:106703412..106711781(-)


>ENSCAFG00000003495
ATGGTCCGTCCGCGCCGCGCTCCGCACCGCTCCGGCGCTGGGGGCCCCCTCGGGGGTCGCGGCCGCCCCCCGCGGCCCCT
CACGGTGCGCGCCGCCCGCTCGCGCTCCTGGCCCGCCAGCCCCCGCGGCCCGCAGCCGCCGCGGATCCGGGCCCGCTCGG
CCCCTCCCATGCAAGGTGCTCGGGTCTTCGGCGCCTTGGGTCCCATCGGGCCCTCCTCTCCTGGGCTCGCCCTCGGGGGC
CTGGCCGTAGGTGAGCACCGGCTCAGCAACAAGCTGCTGGCCTGGAGTGGCGTCCTCGAGTGGCAGGAGAAGCGCAGACC
CTACTCCGACTCTACTGCAAAGCTGAAGCGAGCCCTCCCCTGCCAGGCCTACGTGAATCAGGGCGAGAACCTGGAGACGG
ACCAGTGGCCCCAGAAGCTGATCATGCAGCTCATCCCGCAGCAGCTGCTGACCACCCTGGGCCCCCTGTTCCGCAACTCC
CAGCTGGCGCAATTCCACTTCACCAACAGAGACTGCGACTCTCTCAAGGGGCTCTGCCGCGTGATGGGCAACGGCTTCGC
GGGGTGTATGCTCTTTCCCCACATCTCCCCCTGCGAGGTGCGCGTACTCATGCTCCTGTACTCGTCCAAGAAAAAGATCT
TCATGGGCCTCATCCCTTATGACCAGAGCGGCTTCGTCAATGCCATCCGGCAGGTTATCACCACGCGCAAACAGGCAGTG
GGCCCTGGTGGTGTCGCGGGCCCGGTGCAGATCGTCAACAACAAGTTCCTAGCGTGGAGTGGAGTCATGGAGTGGCAAGA
GCCCAGGCCTGAGCCCAACAGTCGGTCCAAGAGGTGGCTGCCATCACATGTCTACGTGAACCAAGGGGAGATCCTGAGGA
CTGAGCAGTGGCCAAGGAAGCTGTACATGCAGCTCATCCCACAGCAGCTGCTGACCACCCTGGTACCACTGTTTCGGAAC
TCGCGCCTGGTCCAGTTCCACTTCACCAAGGACCTGGAGACGCTGAAGAGCCTGTGCCGGATCATGGACAATGGCTTTGC
CGGCTGCGTGCACTTTTCCTACAAGGCATCGTGCGAGGTGCGCGTGCTCATGCTCCTGTACTCGTCAGAGAAGAAGATCT
TCATCGGCCTCATCCCCCATGACCAGAGCAACTTCGTCAACGGCATCCGGCGTGTCATCGCCAACCAGCAGCAGGTCCTG
CAGCGGAACCTGGAGCAGGAGCAGCAGCAGCGCGGGATGGGGGGGTAG

Library Parental gene expression (RPM)
SRP017611_brain 88 .13 RPM
SRP017611_kidney 53 .16 RPM
SRP017611_liver 35 .39 RPM
SRP012049_cerebellum 215 .12 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000004105 ortholog_one2one 1 retrogene
retro_cjac_445,
Homo sapiens ENSG00000104960 ortholog_one2one 1 retrogene
retro_hsap_2694,
Gorilla gorilla ENSGGOG00000010182 ortholog_one2one 1 retrogene
retro_ggor_1877,
Macaca mulatta ENSMMUG00000011618 ortholog_one2one 1 retrogene
retro_mmul_1426,
Nomascus leucogenys ENSNLEG00000005374 ortholog_one2one 1 retrogene
retro_nleu_1191,
Pongo abelii ENSPPYG00000010265 ortholog_one2one 1 retrogene
retro_pabe_2288,
Pan troglodytes ENSPTRG00000011321 ortholog_one2one 1 retrogene
retro_ptro_1818,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_289 89.25 50.84
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Download FASTA sequences of all ENSCAFG00000003495 retrocopies