Parental gene: | PTOV1, ENSPTRG00000011321 |
| Aliases: | None |
| Description: | prostate tumor overexpressed 1 [Source:HGNC Symbol;Acc:9632] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 19:54855463..54864614(+) |
>ENSPTRG00000011321
ATGGTCCGTCCGCGCCGCGCCCCGGACCGCTCCGGCGCCGGGGGCCCCCTCGGGGGTCGCGGCCGCCCTCCGCGGCCCCT
CCTGGTGCGCGCCGTCCGCTCGCGCTCCTGGCCTGCCAGCCCCCGAGGACCGCAGACTGAAGGTGCTCGGGTCTTCGGGG
CACTGGGTCCCATCGGTCCCTCCTCACCTGGGCTCACCCTCGGGGGTCTGGCCGTGAGCGAGCACCGGCTCAGCAACAAG
CTGCTGGCTTGGAGCGGCGTCCTCGAGTGGCAGGAGAAGCGCAGACCCTACTCTGACTCCACTGCAAAGCTGAAGCGGAC
CCTGCCCTGCCAAGCCTACGTGAACCAAGGCGAGAACCTGGAGACCGACCAGTGGCCGCAGAAGCTGATCATGCAGCTGA
TCCCGCAGCAGCTGCTGACCACCCTGGGCCCCCTGTTCCGGAACTCCCAGTTGGCACAGTTCCACTTCACCAACAGAGAC
TGCGACTCGCTCAAGGGGCTCTGCCGCATCATGGGCAACGGCTTCGCGGGCTGCATGCTGTTCCCCCACATCTCCCCCTG
TGAGGTGCGCGTGCTCATGCTCCTGTACTCGTCCAAGAAGAAGATCTTCATGGGCCTCATCCCCTACGACCAGAGCGGCT
TCGTCAGTGCCATCCGGCAGGTCATCACCACCCGCAAGCAGGCAGTGGGACCTGGTGGTGTCAACTCAGGCCCAGTCCAG
ATCGTCAACAACAAGTTTCTGGCATGGAGTGGCGTCATGGAGTGGCAGGAGCCCAGGCCTGAGCCCAACAGTCGGTCCAA
GAGGTGGCTGCCATCCCACGTCTACGTGAACCAGGGGGAGATCCTGAGGACCGAGCAGTGGCCAAGGAAGCTGTACATGC
AGCTCATCCCGCAGCAGCTGCTGACCACCCTAGTGCCGCTGTTCCGGAACTCGCGCCTGGTCCAGTTCCACTTCACCAAG
GACCTGGAGACACTGAAGAGCCTGTGCCGGATCATGGACAATGGCTTCGCCGGCTGCGTGCACTTTTCCTACAAAGCATC
GTGTGAGATCCGCGTGCTT
ATGGTCCGTCCGCGCCGCGCCCCGGACCGCTCCGGCGCCGGGGGCCCCCTCGGGGGTCGCGGCCGCCCTCCGCGGCCCCT
CCTGGTGCGCGCCGTCCGCTCGCGCTCCTGGCCTGCCAGCCCCCGAGGACCGCAGACTGAAGGTGCTCGGGTCTTCGGGG
CACTGGGTCCCATCGGTCCCTCCTCACCTGGGCTCACCCTCGGGGGTCTGGCCGTGAGCGAGCACCGGCTCAGCAACAAG
CTGCTGGCTTGGAGCGGCGTCCTCGAGTGGCAGGAGAAGCGCAGACCCTACTCTGACTCCACTGCAAAGCTGAAGCGGAC
CCTGCCCTGCCAAGCCTACGTGAACCAAGGCGAGAACCTGGAGACCGACCAGTGGCCGCAGAAGCTGATCATGCAGCTGA
TCCCGCAGCAGCTGCTGACCACCCTGGGCCCCCTGTTCCGGAACTCCCAGTTGGCACAGTTCCACTTCACCAACAGAGAC
TGCGACTCGCTCAAGGGGCTCTGCCGCATCATGGGCAACGGCTTCGCGGGCTGCATGCTGTTCCCCCACATCTCCCCCTG
TGAGGTGCGCGTGCTCATGCTCCTGTACTCGTCCAAGAAGAAGATCTTCATGGGCCTCATCCCCTACGACCAGAGCGGCT
TCGTCAGTGCCATCCGGCAGGTCATCACCACCCGCAAGCAGGCAGTGGGACCTGGTGGTGTCAACTCAGGCCCAGTCCAG
ATCGTCAACAACAAGTTTCTGGCATGGAGTGGCGTCATGGAGTGGCAGGAGCCCAGGCCTGAGCCCAACAGTCGGTCCAA
GAGGTGGCTGCCATCCCACGTCTACGTGAACCAGGGGGAGATCCTGAGGACCGAGCAGTGGCCAAGGAAGCTGTACATGC
AGCTCATCCCGCAGCAGCTGCTGACCACCCTAGTGCCGCTGTTCCGGAACTCGCGCCTGGTCCAGTTCCACTTCACCAAG
GACCTGGAGACACTGAAGAGCCTGTGCCGGATCATGGACAATGGCTTCGCCGGCTGCGTGCACTTTTCCTACAAAGCATC
GTGTGAGATCCGCGTGCTT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 83 .26 RPM |
| SRP007412_cerebellum | 44 .63 RPM |
| SRP007412_heart | 9 .79 RPM |
| SRP007412_kidney | 73 .70 RPM |
| SRP007412_liver | 36 .70 RPM |
| SRP007412_testis | 23 .82 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000003495 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000004105 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000104960 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000010182 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000011618 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000005374 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000010265 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1818 | 88.10 | 87.82 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000011321 retrocopies