Parental gene:

PTOV1, ENSG00000104960

Aliases:PTOV1, ACID2, PTOV-1
Description:prostate tumor overexpressed 1 [Source:HGNC Symbol;Acc:9632]
Organism:Human (Homo sapiens)
Coordinates:19:50353991..50364001(+)


>ENSG00000104960
ATGGTCCGTCCGCGCCGTGCCCCGTACCGCTCCGGCGCCGGGGGCCCCCTCGGGGGTCGCGGCCGCCCTCCGCGGCCCCT
CGTGGTGCGCGCCGTCCGCTCGCGCTCCTGGCCTGCCAGCCCCCGAGGCCCGCAGCCTCCGCGGATCCGGGCCCGCTCGG
CCCCTCCCATGGAAGGTGCTCGGGTCTTCGGGGCACTGGGTCCCATCGGTCCCTCCTCACCTGGGCTCACCCTCGGGGGT
CTGGCCGTGAGCGAGCACCGGCTCAGCAACAAGCTGCTGGCTTGGAGCGGCGTCCTCGAGTGGCAGGAGAAGCGCAGACC
CTACTCTGACTCCACTGCAAAGCTGAAGCGGACCCTGCCCTGCCAAGCCTACGTGAACCAAGGCGAGAACCTGGAGACCG
ACCAGTGGCCGCAGAAGCTGATCATGCAGCTGATCCCTCAGCAGCTGCTGACCACCCTGGGCCCCCTGTTCCGGAACTCC
CAGTTGGCACAGTTCCACTTCACCAACAGAGACTGCGACTCGCTCAAGGGGCTCTGCCGCATCATGGGCAACGGCTTCGC
GGGCTGCATGCTGTTCCCCCACATCTCCCCCTGTGAGGTGCGCGTGCTCATGCTCCTGTACTCGTCCAAGAAGAAGATCT
TCATGGGCCTCATCCCCTACGACCAGAGCGGCTTCGTCAGTGCCATCCGGCAGGTCATCACCACCCGCAAGCAGGCAGTG
GGACCTGGTGGTGTCAACTCAGGCCCAGTCCAGATCGTCAACAACAAGTTTCTGGCATGGAGTGGTGTCATGGAGTGGCA
GGAGCCCAGGCCTGAGCCCAACAGTCGGTCCAAGAGGTGGCTGCCATCCCACGTCTACGTGAACCAGGGGGAGATCCTGA
GGACCGAGCAGTGGCCAAGGAAGCTGTACATGCAGCTCATCCCGCAGCAGCTGCTGACCACCCTAGTGCCGCTGTTCCGG
AACTCGCGCCTGGTCCAGTTCCACTTCACCAAGGACCTGGAGACACTGAAGAGCCTGTGCCGGATCATGGACAATGGCTT
CGCCGGCTGCGTGCACTTTTCCTACAAAGCATCGTGTGAGATCCGCGTGCTTATGCTCCTGTACTCTTCAGAGAAGAAAA
TCTTCATTGGCCTCATCCCCCATGACCAGGGCAACTTTGTCAACGGCATCCGGCGTGTCATTGCCAACCAGCAGCAGGTC
CTGCAGCGGAACCTGGAGCAGGAGCAACAGCAACGAGGGATGGGGGGGTAG

Library Parental gene expression (RPM)
bodymap2_liver 21 .76 RPM
bodymap2_lung 40 .72 RPM
bodymap2_breast 28 .93 RPM
bodymap2_adipose 35 .30 RPM
bodymap2_adrenal 42 .66 RPM
bodymap2_skeletal_muscle 48 .85 RPM
bodymap2_thyroid 55 .51 RPM
bodymap2_prostate 53 .71 RPM
bodymap2_colon 47 .93 RPM
bodymap2_testis 85 .42 RPM
bodymap2_brain 35 .32 RPM
bodymap2_heart 16 .12 RPM
bodymap2_white_blood_cells 13 .88 RPM
bodymap2_lymph_node 79 .47 RPM
bodymap2_ovary 68 .80 RPM
bodymap2_kidney 39 .42 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000003495 ortholog_one2one 1 retrogene
retro_cfam_289,
Callithrix jacchus ENSCJAG00000004105 ortholog_one2one 1 retrogene
retro_cjac_445,
Gorilla gorilla ENSGGOG00000010182 ortholog_one2one 1 retrogene
retro_ggor_1877,
Macaca mulatta ENSMMUG00000011618 ortholog_one2one 1 retrogene
retro_mmul_1426,
Nomascus leucogenys ENSNLEG00000005374 ortholog_one2one 1 retrogene
retro_nleu_1191,
Pongo abelii ENSPPYG00000010265 ortholog_one2one 1 retrogene
retro_pabe_2288,
Pan troglodytes ENSPTRG00000011321 ortholog_one2one 1 retrogene
retro_ptro_1818,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2694 87.15 95.19
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Download FASTA sequences of all ENSG00000104960 retrocopies