Parental gene: | NIPSNAP1, ENSCAFG00000012291 |
| Aliases: | None |
| Description: | nipsnap homolog 1 (C. elegans) [Source:HGNC Symbol;Acc:7827] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 26:22786990..22800195(-) |
>ENSCAFG00000012291
ATGGCTCCGCGGCTGTGCAGCATCTCTGCGGCGGCGCGGCGGCTGCTGGGGAGCCCGAAGCCCCGCGCCGGGGATGTCGC
GGCTGCTGCGCGCTTGAGAATCTTCTATTCCAAGGACAATGAAGGGAGCTGGTTCCGCTCCCTCTTTGTGCACAAGGTGG
ATCCCCGGAAGGATGCCCACTCCACCCTGCTATCCAAGAAGGAAACCAGCAACCTCTACAAGATCCAGTTTCACAATGTG
AAGCCTGAATGTCTGGATGCCTACAACAGCCTGACGGAGGCTGTGCTGCCCAAGCTGCACCTGGATGAGGACTACCCCTG
CTCGCTCGTGGGCAACTGGAACACATGGTACGGGGAGCAGGACCAGGCAGTACACCTGTGGCGATTCTCAGGTGGCTATC
CAGCCCTCATGGACTGCATGAATAAGCTCAAAAGCAACAAGGAGTACCTGGAGTTCCGAAAGGAGCGGAGCCAGATGCTA
CTGTCGAGGAGAAACCAGATGCTTCTTGAGTTCAGCTTCTGGAATGAGCCACAGCCCAGAGCAGGCCCCAACATCTATGA
GCTGAGGACATACAAGCTCAAGCCAGGAACCATGATTGAGTGGGGAAACAACTGGGCTCGGGCAATCAAGTACCGGCAAG
AGAACCAGGAGGCAGTAGGTGGCTTCTTCTCGCAGATTGGAGAGCTCTACGTTGTACACCATCTCTGGGCCTATAAAGAC
CTGCAATCTCGGGAAGAGACTCGAAATGCTGCTTGGAGAAAGAGAGGCTGGGACGAAAATGTCTACTACACAGTCCCATT
GGTGCGACACATGGAGTCTCGGATCATGATCCCGTTGAAGATCTCGCCTCTCCAGTGA
ATGGCTCCGCGGCTGTGCAGCATCTCTGCGGCGGCGCGGCGGCTGCTGGGGAGCCCGAAGCCCCGCGCCGGGGATGTCGC
GGCTGCTGCGCGCTTGAGAATCTTCTATTCCAAGGACAATGAAGGGAGCTGGTTCCGCTCCCTCTTTGTGCACAAGGTGG
ATCCCCGGAAGGATGCCCACTCCACCCTGCTATCCAAGAAGGAAACCAGCAACCTCTACAAGATCCAGTTTCACAATGTG
AAGCCTGAATGTCTGGATGCCTACAACAGCCTGACGGAGGCTGTGCTGCCCAAGCTGCACCTGGATGAGGACTACCCCTG
CTCGCTCGTGGGCAACTGGAACACATGGTACGGGGAGCAGGACCAGGCAGTACACCTGTGGCGATTCTCAGGTGGCTATC
CAGCCCTCATGGACTGCATGAATAAGCTCAAAAGCAACAAGGAGTACCTGGAGTTCCGAAAGGAGCGGAGCCAGATGCTA
CTGTCGAGGAGAAACCAGATGCTTCTTGAGTTCAGCTTCTGGAATGAGCCACAGCCCAGAGCAGGCCCCAACATCTATGA
GCTGAGGACATACAAGCTCAAGCCAGGAACCATGATTGAGTGGGGAAACAACTGGGCTCGGGCAATCAAGTACCGGCAAG
AGAACCAGGAGGCAGTAGGTGGCTTCTTCTCGCAGATTGGAGAGCTCTACGTTGTACACCATCTCTGGGCCTATAAAGAC
CTGCAATCTCGGGAAGAGACTCGAAATGCTGCTTGGAGAAAGAGAGGCTGGGACGAAAATGTCTACTACACAGTCCCATT
GGTGCGACACATGGAGTCTCGGATCATGATCCCGTTGAAGATCTCGCCTCTCCAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 36 .20 RPM |
| SRP017611_kidney | 91 .73 RPM |
| SRP017611_liver | 81 .21 RPM |
| SRP012049_cerebellum | 35 .11 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Otolemur garnettii | ENSOGAG00000012167 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000017876 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000009988 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000004614 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_2091 | 92.63 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000012291 retrocopies