Parental gene:

NIPSNAP1, ENSSSCG00000009988

Aliases:None
Description:nipsnap homolog 1 (C. elegans) [Source:HGNC Symbol;Acc:7827]
Organism:Pig (Sus scrofa)
Coordinates:14:49658211..49675678(-)


>ENSSSCG00000009988
ATGGCTCCGCGTCTGTGCAGCATCTCTGCGGCGGCGCGGCGGCTACTGGGGGGCCCAGGGCTTGGTGCCCGGGACACTGC
GGCTGTGGCTGCGGCGCGGTTCTATTCCAAGGACAATGAAGGCAGCTGGTTCCGTTCCCTCTTCGTACACAAGGTGGATC
CTCGGAAGGATGCCCACTCTACCCTGCTGTCTAAGAAGGAGACCAGCAACCTCTACAAGATCCAGTTTCACAATGTGAAG
CCCGAGTGTCTGGATGCCTACAACAGCCTGACGGAGGCCGTGCTGCCCAAGCTGCACCTGGATGAGGACTACCCCTGCTC
GCTTGTGGGCAACTGGAACACGTGGTACGGGGAGCAGGACCAGGCTGTACACCTGTGGCGATTCTCAGGTGGCTACCCAG
CCCTCATGGACTGCATGAACAAGCTCAAAAACAACAAGGAGTACCTGGAGTTCCGAAAGGAGCGGAGCCAGATGCTGCTT
TCCAGGAGGAACCAGATGCTTCTCGAGTTCAGCTTCTGGAATGAGCCACAGCCTCGAGCTGGCCCCAACATCTACGAGCT
GAGGACGTACAAGCTCAAGCCAGGAACCATGATCGAGTGGGGGAACAACTGGGCTCGGGCCATCAAGTACCGGCAGGAGA
ACCAGGAAGCAGTGGGCGGCTTCTTCTCGCAGATAGGAGAGCTCTACGTTGTGCACCATCTCTGGGCCTATAAGGACCTG
CAGTCTCGGGAGGAGACCCGAAACGCTGCCTGGAGGAAGAGGGGCTGGGATGAAAATGTCTACTACACAGTCCCCCTGGT
GCGACACATGGAGTCTCGGATCATGATCCCTTTGAAGATCTCGCCTCTGCAGTGA

Library Parental gene expression (RPM)
SRP014902_placenta 16 .33 RPM
SRP014902_testis 22 .63 RPM
SRP018856_adipose 17 .97 RPM
SRP018288_kidney 115 .15 RPM
SRP018288_lung 9 .67 RPM
SRP018288_liver 160 .39 RPM
SRP018288_heart 2 .72 RPM
SRP035408_liver 196 .45 RPM
SRP035408_brain 72 .67 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000012291 ortholog_one2one 1 retrogene
retro_cfam_2091,
Otolemur garnettii ENSOGAG00000012167 ortholog_one2one 1 retrogene
retro_ogar_2741,
Pteropus vampyrus ENSPVAG00000017876 ortholog_one2one 1 retrogene
retro_pvam_675,
Tupaia belangeri ENSTBEG00000004614 ortholog_one2one 3 retrogenes
retro_tbel_247, retro_tbel_4673, retro_tbel_968,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_615 61.42 89.08
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Download FASTA sequences of all ENSSSCG00000009988 retrocopies