Parental gene:

ENSCAFG00000013864

Aliases:None
Description:None
Organism:Dog (Canis familiaris)
Coordinates:26:28249999..28263357(+)


>ENSCAFG00000013864
ATGTCTATTGGTGTGCCGATTAAAGTCCTTCACGAAGCCGAGGGCCACATCGTGACATGTGAGACAAACACTGGCGAGGT
GTATCGTGGGAAGCTCATTGAGGCGGAAGACAACATGAACTGCCAGATGTCCAACATCACAGTCACATACAGAGATGGCC
GAGTGGCACAGCTGGAGCAGGTGTACATCCGTGGCAGCAAGATCCGCTTTCTCATTTTGCCTGACATGCTGAAAAATGCA
CCCATGTTAAAGAGCATGAAAAACAAAAACCAAGGCTCGGGAGCTGGCCGGGGGAAAGCTGCTATTCTGAAAGCTCAAGT
GGCTGCAAGAGGAAGAGGACGTGGAATGGGGCGTGGAAACATCTTCCAGAAGCGGAGATAA

Library Parental gene expression (RPM)
SRP017611_brain 6 .51 RPM
SRP017611_kidney 16 .25 RPM
SRP017611_liver 7 .47 RPM
SRP012049_cerebellum 14 .91 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000012304 possible_ortholog 1 retrogene
retro_cpor_297,
Dasypus novemcinctus ENSDNOG00000018004 possible_ortholog 1 retrogene
retro_dnov_2611,
Dipodomys ordii ENSDORG00000005801 possible_ortholog 1 retrogene
retro_dord_791,
Otolemur garnettii ENSOGAG00000012708 possible_ortholog 3 retrogenes
retro_ogar_1209, retro_ogar_2077, retro_ogar_2235,
Rattus norvegicus ENSRNOG00000050410 ortholog_one2one 1 retrogene
retro_rnor_232,
Ictidomys tridecemlineatus ENSSTOG00000025674 possible_ortholog 1 retrogene
retro_itri_651,
Tarsius syrichta ENSTSYG00000007649 ortholog_one2one 1 retrogene
retro_tsyr_1489,
Tursiops truncatus ENSTTRG00000006022 possible_ortholog 1 retrogene
retro_ttru_1240,
Vicugna pacos ENSVPAG00000000241 possible_ortholog 2 retrogenes
retro_vpac_338, retro_vpac_348,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_173 99.21 100.00
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Download FASTA sequences of all ENSCAFG00000013864 retrocopies