Parental gene:

Snrpd3, ENSRNOG00000050410

Aliases:None
Description:small nuclear ribonucleoprotein D3 [Source:MGI Symbol;Acc:MGI:1914582]
Organism:Rat (Rattus norvegicus)
Coordinates:20:16266052..16279075(-)


>ENSRNOG00000050410
ATGTCTATCGGTGTGCCAATTAAAGTCCTGCACGAAGCGGAAGGCCACATAGTGACATGTGAGACCAACACTGGTGAAGT
GTATCGGGGGAAGCTCATTGAGGCAGAGGACAACATGAACTGCCAGATGTCCAACATCACAGTCACATACAGAGACGGCC
GAGTGGCACAGCTGGAACAGGTGTACATACGTGGCAGCAAGATCCGGTTTCTGATTTTGCCTGACATGCTGAAAAATGCA
CCCATGTTAAAGAGCATGAAAAATAAAAACCAAGGCTCAGGGGCTGGCCGAGGAAAAGCTGCTATCCTGAAGGCCCAAGT
GGCTGCAAGAGGAAGAGGACGTGGAATGGGGCGTGGAAACATTTTCCAGAAGCGAAGATAG

Library Parental gene expression (RPM)
SRP017611_brain 22 .43 RPM
SRP017611_kidney 35 .80 RPM
SRP017611_liver 12 .71 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000013864 ortholog_one2one 1 retrogene
retro_cfam_173,
Cavia porcellus ENSCPOG00000012304 possible_ortholog 1 retrogene
retro_cpor_297,
Dipodomys ordii ENSDORG00000005801 possible_ortholog 1 retrogene
retro_dord_791,
Otolemur garnettii ENSOGAG00000012708 possible_ortholog 3 retrogenes
retro_ogar_1209, retro_ogar_2077, retro_ogar_2235,
Tarsius syrichta ENSTSYG00000007649 ortholog_one2one 1 retrogene
retro_tsyr_1489,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_232 79.49 92.86
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Download FASTA sequences of all ENSRNOG00000050410 retrocopies