Parental gene: | SDHB, ENSCAFG00000015832 |
| Aliases: | None |
| Description: | Canis lupus familiaris succinate dehydrogenase complex, subunit B, iron sulfur (Ip) (SDHB), nuclear gene encoding mitochondrial protein, mRNA. [Source:RefSeq mRNA;Acc:NM_001252217] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 2:81158290..81190114(+) |
>ENSCAFG00000015832
ATGGCGGCGGTGGTCGGAGTCTCCTTGAAACGCCGGTTCCCGGCTGCAGCCCTCGGCGGAGCCTGCCTGCAGGCCTGCCG
GGGGGCACAGACAGCGGCAGCCACAGCTCCCCGAATCAAGAAATTTGCCATCTACCGATGGGACCCAGACAAGACTGGAG
ATAAACCGCATATGCAGACTTATGAAATTGATTTGAATAAATGTGGTCCTATGGTGTTGGATGCTTTAATCAAGATTAAG
AATGAAATTGACTCTACCTTGACCTTCCGAAGATCATGCAGAGAAGGCATCTGTGGCTCCTGTGCCATGAACATCAACGG
AGGCAACACTCTGGCTTGCACCCGCCGGATCGACACCAACCTCAGCAAAGTCTCCAAAATCTACCCTCTGCCGCATATGT
ATGTGATAAAGGATCTGGTTCCTGACTTGAGCAACTTCTATGCTCAGTATAAATCCATTGAACCTTATTTGAAGAAGAAG
GATGAATCCCAAGAGGGCAAGCAGCAGTATCTGCAGTCCATAGAAGATCGTGAGAAACTGGACGGGCTGTACGAGTGTAT
CCTCTGTGCTTGCTGCAGCACCAGCTGCCCTAGCTACTGGTGGAATGGAGACAAATACCTGGGGCCTGCGGTTCTCATGC
AGGCCTACCGCTGGATGATCGACTCCAGAGACGACTTCACTGAGGAGCGCCTGGCCAAGCTGCAGGACCCGTTCTCTCTG
TACCGCTGCCACACCATCATGAACTGCACAAGGACCTGCCCCAAGGGGCTGAATCCAGGCAAAGCTATTGCTGAAATCAA
GAAAATGATGGCCACCTATAAGGGGAAGAAAGCGTCCGTGTGA
ATGGCGGCGGTGGTCGGAGTCTCCTTGAAACGCCGGTTCCCGGCTGCAGCCCTCGGCGGAGCCTGCCTGCAGGCCTGCCG
GGGGGCACAGACAGCGGCAGCCACAGCTCCCCGAATCAAGAAATTTGCCATCTACCGATGGGACCCAGACAAGACTGGAG
ATAAACCGCATATGCAGACTTATGAAATTGATTTGAATAAATGTGGTCCTATGGTGTTGGATGCTTTAATCAAGATTAAG
AATGAAATTGACTCTACCTTGACCTTCCGAAGATCATGCAGAGAAGGCATCTGTGGCTCCTGTGCCATGAACATCAACGG
AGGCAACACTCTGGCTTGCACCCGCCGGATCGACACCAACCTCAGCAAAGTCTCCAAAATCTACCCTCTGCCGCATATGT
ATGTGATAAAGGATCTGGTTCCTGACTTGAGCAACTTCTATGCTCAGTATAAATCCATTGAACCTTATTTGAAGAAGAAG
GATGAATCCCAAGAGGGCAAGCAGCAGTATCTGCAGTCCATAGAAGATCGTGAGAAACTGGACGGGCTGTACGAGTGTAT
CCTCTGTGCTTGCTGCAGCACCAGCTGCCCTAGCTACTGGTGGAATGGAGACAAATACCTGGGGCCTGCGGTTCTCATGC
AGGCCTACCGCTGGATGATCGACTCCAGAGACGACTTCACTGAGGAGCGCCTGGCCAAGCTGCAGGACCCGTTCTCTCTG
TACCGCTGCCACACCATCATGAACTGCACAAGGACCTGCCCCAAGGGGCTGAATCCAGGCAAAGCTATTGCTGAAATCAA
GAAAATGATGGCCACCTATAAGGGGAAGAAAGCGTCCGTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 14 .21 RPM |
| SRP017611_kidney | 89 .35 RPM |
| SRP017611_liver | 58 .08 RPM |
| SRP012049_cerebellum | 22 .55 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000005664 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000007927 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000018475 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000004817 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000016629 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000000032 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000013264 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000013780 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000004803 | ortholog_one2one | 2 retrogenes | |
| Xenopus tropicalis | ENSXETG00000013435 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_587 | 98.93 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000015832 retrocopies