Parental gene:

sdhb, ENSXETG00000013435

Aliases:None
Description:succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Source:Jamboree;Acc:XB-GENE-970193]
Organism:Xenopus (Xenopus tropicalis)
Coordinates:GL173671.1:25152..31072(+)


>ENSXETG00000013435
ATGGCGGCGGTCGTGTTCTCCTTGAGACGTAGCGGGCCGGTGTTCCGGTTACCGGGAGTCCTGCAGGTTTGTCGTGGGGC
ACAGACAGCTGCCGCCGCTGCCCCCGCCTCCCAGGCAGAGGCTCGCATCAAGAAATTTGCCATCTACAGATGGGACCCCG
ACAAGCCCGGCGACAAGCCCCGTATGCAGACTTATGAGGTCGACTTGAATGAGTGTGGCTCCATGGTGCTGGACGCGCTG
ATCAAGATTAAGAATGAGATGGACCCCACCCTGACCTTCCGCAGATCCTGCCGAGAGGGTATATGTGGCTCCTGCGCCAT
GAACATTAACGGGGGTAACACCCTGGCCTGCACCGTGAGGATAGACACCAACCTGAGCAAAGTCTCCAAAATCTACCCCC
TCCCTCACATGTATGTTGTAAAGGATCTTGTGCCTGATCTGAGTAATTTCTATGCGCAGTACAAGTCCATAGAGCCGTAC
CTGAAGAAGAAGGACGAGTCGCAGGAGGGCAAGGAGCAGTACCTGCAGTCTATAGAGGACCGGGATAAGCTGGACGGGCT
ATACGAGTGCATTCTGTGCGCCTGTTGCAGTACCAGCTGCCCCAGTTACTGGTGGAACGCAGATAAATATCTGGGCCCGG
CCGTGCTAATGCAGGCCTATCGGTGGATGATCGACTCCAGAGACGACTACACGGAGGAGCGGCTGGCCAAACTGCAGGAC
CCCTTCTCCCTGTACCGCTGCCACACCATCATGAACTGCACGCGCACATGCCCCAAGGGGCTGAACCCGGGCAAAGCCAT
CGCCGAGATAAAGAAGATGATGGCGACGTACAAGGAGAGAGCGGCGTCGGTGTAG

Library Parental gene expression (RPM)
SRP007412_brain 100 .18 RPM
SRP007412_skeletal_muscle 149 .43 RPM
SRP007412_heart 151 .15 RPM
SRP007412_kidney 151 .15 RPM
SRP007412_liver 74 .54 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000015832 ortholog_one2one 1 retrogene
retro_cfam_587,
Choloepus hoffmanni ENSCHOG00000005664 ortholog_one2one 1 retrogene
retro_chof_2016,
Callithrix jacchus ENSCJAG00000007927 ortholog_one2one 1 retrogene
retro_cjac_2988,
Loxodonta africana ENSLAFG00000018475 ortholog_one2one 1 retrogene
retro_lafr_454,
Macropus eugenii ENSMEUG00000004817 ortholog_one2one 1 retrogene
retro_meug_1106,
Microcebus murinus ENSMICG00000016629 ortholog_one2one 1 retrogene
retro_mmur_1062,
Myotis lucifugus ENSMLUG00000000032 ortholog_one2many 1 retrogene
retro_mluc_150,
Nomascus leucogenys ENSNLEG00000013264 ortholog_one2one 1 retrogene
retro_nleu_1640,
Sorex araneus ENSSARG00000013780 ortholog_one2one 1 retrogene
retro_sara_577,
Tupaia belangeri ENSTBEG00000004803 ortholog_one2one 2 retrogenes
retro_tbel_2480, retro_tbel_2875,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_xtro_60 57.61 64.79
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Download FASTA sequences of all ENSXETG00000013435 retrocopies