Parental gene:

SUPT4H1, ENSCAFG00000017524

Aliases:None
Description:suppressor of Ty 4 homolog 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:11467]
Organism:Dog (Canis familiaris)
Coordinates:9:32990386..32995912(-)


>ENSCAFG00000017524
ATGGCGCTGGAGACGGTGCCGAAGGACCTGCGGCATCTGCGGGCTTGTTTGCTGTGTTCGCTGGTCAAGACTATAGACCA
GTTTGAATATGACGGTTGTGACAATTGTGATGCATACCTTCAGATGAAGGGTAACCGGGAGATGGTATATGACTGCACCA
GCTCTTCCTTTGATGGAATCATTGCGATGATGAGTCCAGAGGACAGCTGGGTCTCCAAGTGGCAGCGAGTCAGTAACTTT
AAGCCGGGTGTATATGCAGTGTCAGTCACTGGCCGCCTTCCCCAAGGAATCGTGCGAGAGCTGAAAAGTCGAGGAGTGGC
CTACAAATCCAGAGACACAGCTATAAAGACC

Library Parental gene expression (RPM)
SRP012049_cerebellum 27 .43 RPM
SRP017611_brain 14 .45 RPM
SRP017611_kidney 44 .84 RPM
SRP017611_liver 9 .35 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000213246 ortholog_one2one 2 retrogenes
retro_hsap_1081, retro_hsap_2280,
Gorilla gorilla ENSGGOG00000007232 ortholog_one2one 2 retrogenes
retro_ggor_1693, retro_ggor_854,
Macropus eugenii ENSMEUG00000010164 ortholog_one2one 1 retrogene
retro_meug_2079,
Myotis lucifugus ENSMLUG00000025583 possible_ortholog 1 retrogene
retro_mluc_761,
Macaca mulatta ENSMMUG00000007579 ortholog_one2one 2 retrogenes
retro_mmul_1005, retro_mmul_842,
Mus musculus ENSMUSG00000020485 ortholog_one2one 2 retrogenes
retro_mmus_2857, retro_mmus_633,
Nomascus leucogenys ENSNLEG00000008159 ortholog_one2one 3 retrogenes
retro_nleu_1619, retro_nleu_1962, retro_nleu_2714,
Oryctolagus cuniculus ENSOCUG00000025823 ortholog_one2one 2 retrogenes
retro_ocun_1613, retro_ocun_1636,
Pongo abelii ENSPPYG00000008233 ortholog_one2one 1 retrogene
retro_pabe_1940,
Pan troglodytes ENSPTRG00000009451 ortholog_one2one 2 retrogenes
retro_ptro_1614, retro_ptro_735,
Pteropus vampyrus ENSPVAG00000002320 ortholog_one2one 1 retrogene
retro_pvam_477,
Rattus norvegicus ENSRNOG00000007845 ortholog_one2one 3 retrogenes
retro_rnor_1255, retro_rnor_1973, retro_rnor_556,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_553 77.63 64.10
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2. retro_cfam_1399 71.43 88.03
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Download FASTA sequences of all ENSCAFG00000017524 retrocopies