Parental gene:

NUP62CL, ENSCAFG00000017963

Aliases:None
Description:nucleoporin 62kDa C-terminal like [Source:HGNC Symbol;Acc:25960]
Organism:Dog (Canis familiaris)
Coordinates:X:80708605..80803192(-)


>ENSCAFG00000017963
ATAAGTGGGTTTAATTTTGGAGAAACTGGTACCCCTTCAGGTGGGTTCACTTTTGGCCCTGCAAAGACAGTAACCACCAC
TTCAGCTATCGGGTTTACATTCTCTACACCTGGTGCAAGAGGGTTTAAGTTTAGGACTCTACCCCAACCAGTAAGTACCT
CTTCTACTGCCCTGTTCTCATTCAGTAATGCAGCTCCAGCTTCACAGACCAAACCATTCAGCTTTGGAATACCTCCTGCC
ACAGAAGAAACTGGGTTTTCTCTTAGAATAAGTGCACCAAAATTAAACTTGGGCAATACTTGCTCTCTCATACAACCTGC
AGTGATTACAGGAGCTTCAAGGCTGAGTACCAGCACTCTTACCAACACCTTAACATGCAGTGTCCCATCGTACTGGGTGA
CAGCGTCCAGCTTTGTTTTTGGCTCTGCTATCACCTCTGCTACTGAGTCTGCAACTGCCACAGGGTTCTCATTCATCAGT
GGAAGTATTGCTTCAAATCCAAATATGACTCACTTCTCTTGCTGGAGTTTAATTGAGAAGGCATGGCCAACAAGTATTAC
CCCTACTCCCTCCACTCCCTCCATTCAACTGACCACTGTAATTCCCTCTACCTGTTTGGCTTCAGCATCGGCTGCTGACG
CCACTACTTGTTCAGGCACCATGCTGTTTACTTCAACGTCAAATGCTTCTACTTCTGCTGCTGCTACTGGGCTCTCTTTT
GGTGCTCCAGCAACTTCAATGGGCACATTTGGTGGCATAACTTTGGGATTTGGATTAAAATTCCCTGGAGCAGGTGGAGC
AGCTCATACTGCATCTACTACAGCATCAACAACGACTACTACCACTGTTACCACGACCACCACTACTACAACCACTAGTG
GCTTTACCTTGAACCTAAGGTCACTGACATCAGCTGGGATTAATAACATTGTTCCAGTCGGTATTAATTCTCTACCTTTT
ACTTCGACTGTTAATGCAATTGTAACTCCTGTGATGACATATGGTCAGCTAGAGGGTCTGATAAACAAATGGAGTCTTGA
TTTAGAAGATCAAGAGAAGTACTTTCTTCACCAGGCCACTCAGGTCAATGCTTGGGACCGTACATTGATTGAGAATGGTG
AGAAGATTACTACTTTACATGGAGAAGTGGAAAAAGTGAAACTGGATCAACAGAGGCTGGAACAAGAATTAGATTTTATT
CTGTCACAGCAGAAGGAACTAGAAGATCTCTTGACCCCTTTAGAGGAGTTTGTGAAGGACCAGAGTGGGTCTGTGTATCT
GCAGCATGCAGATAAGGTGCATGGGAAGACTTACAGATTAGCAGAAAATATAGATGCTCAGCTAAAACGAATGGCCCAAG
ATCTCAAGGACATTATTGAGCACCTGAATACATTTGGAAGTCCTGCTGACACTACTGACCCGCTCCAGCAGATCTGCAAA
ATTCTGAATGCTCATATGGACTCTCTACAGTGGATTAATCAGAATTCAGTTAGACTTAAGCCAAAAATAATGGAAAGAAA
GACAAATGCTAAAAAGCAATTAAAAAAATTTCAACAGAGCATTTATATTAAGTTTACC

Library Parental gene expression (RPM)
SRP017611_brain 0 .32 RPM
SRP017611_kidney 0 .92 RPM
SRP017611_liver 0 .00 RPM
SRP012049_cerebellum 2 .73 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000001467 ortholog_one2one 1 retrogene
retro_dnov_1108,
Felis catus ENSFCAG00000001984 ortholog_one2one 1 retrogene
retro_fcat_120,
Macropus eugenii ENSMEUG00000001005 ortholog_one2many 1 retrogene
retro_meug_1130,
Nomascus leucogenys ENSNLEG00000013865 ortholog_one2one 1 retrogene
retro_nleu_2076,
Pteropus vampyrus ENSPVAG00000001787 ortholog_one2one 1 retrogene
retro_pvam_694,
Vicugna pacos ENSVPAG00000003649 ortholog_one2one 1 retrogene
retro_vpac_448,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_218 59.51 99.81
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Download FASTA sequences of all ENSCAFG00000017963 retrocopies