Parental gene: | NDE1, ENSCAFG00000018722 |
| Aliases: | None |
| Description: | Canis lupus familiaris nudE nuclear distribution gene E homolog 1 (A. nidulans) (NDE1), mRNA. [Source:RefSeq mRNA;Acc:NM_001252172] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 6:28143243..28186051(-) |
>ENSCAFG00000018722
ATGGAAGACTCGGGAAAGACTTTCAGTTCTGAGGAGGAAGAAGCGAACTACTGGAAAGATCTGGCTATGACCTACAAGCA
GAGGGCAGAGAACACGCAGGAGGAACTCCGAGAATTCCAGGAGGGAAGCCGCGAATATGAAGCTGAATTGGAGACGCAGC
TGCAACAGATTGAAACCAGGAACAGGGACCTCCTGTCGGAGAATAACCGCCTTCGTATGGAGCTGGAAACCATCAAGGAG
AAGTTTGAAACTCAGCACTCCGAAGGCTACCGGCAGATTTCAGCCTTGGAGGATGACCTTGCCCAGACCAAAGCAATTAA
GGATCAACTTCAGAAATACATCAGAGAGCTGGAGCAAGCAAATGACGACTTGGAAAGAGCAAAACGCAGGGCCACGATCA
TGTCTCTGGAAGACTTTGAGCAGCGTTTGAATCAAGCCATTGAAAGAAATGCCTTCCTGGAGAGTGAGCTTGATGAGAAA
GAGAATCTCCTAGAATCTGTTCAGCGACTGAAGGATGAAGCCAGAGATTTGCGGCAGGAGTTGGCTGTGCAGCAGAAGCA
GGAGAAGCCCCGGACCCCCATGCCTAGCTCGGTGGAAGCCGAAAGGACAGACACAGCTGTGCAGGCCACTGGCTCTGTAC
CATCCACTCCCATAGCTCATCGGGGACCCAGCACTAGCTTAAACACACCAGGGACGTTCAGACGCGACCCAGGTCTGGAC
GACTCTATGGGTGGGACTCCCCTCACTCCTGCAGCACGGATATCGGCCCTCAACATTGTGGGAGACCTGCTTCGGAAAGT
AGGGGCCCTGGAGTCCAAACTTGCGTCCTGCCGGAATTTTGTGTATGATCAGTCCCCAAATCGAACAAGTGGCCCAGCCT
CCGGGCGGGGGAGCAAGCACAGAGATGGCAGTGAGAGACAGCCAAGCAGCACCGGCGTGCCTCTGGGTGATAAAGGGTTG
GGAAAACGCCTGGAATTTGGGAAGCCGCCTTCAAATATTTCCTCACCGTCGCTGCCGTCAGCCCAGGGTGTAGTCAAGAT
GTTGCTTTAG
ATGGAAGACTCGGGAAAGACTTTCAGTTCTGAGGAGGAAGAAGCGAACTACTGGAAAGATCTGGCTATGACCTACAAGCA
GAGGGCAGAGAACACGCAGGAGGAACTCCGAGAATTCCAGGAGGGAAGCCGCGAATATGAAGCTGAATTGGAGACGCAGC
TGCAACAGATTGAAACCAGGAACAGGGACCTCCTGTCGGAGAATAACCGCCTTCGTATGGAGCTGGAAACCATCAAGGAG
AAGTTTGAAACTCAGCACTCCGAAGGCTACCGGCAGATTTCAGCCTTGGAGGATGACCTTGCCCAGACCAAAGCAATTAA
GGATCAACTTCAGAAATACATCAGAGAGCTGGAGCAAGCAAATGACGACTTGGAAAGAGCAAAACGCAGGGCCACGATCA
TGTCTCTGGAAGACTTTGAGCAGCGTTTGAATCAAGCCATTGAAAGAAATGCCTTCCTGGAGAGTGAGCTTGATGAGAAA
GAGAATCTCCTAGAATCTGTTCAGCGACTGAAGGATGAAGCCAGAGATTTGCGGCAGGAGTTGGCTGTGCAGCAGAAGCA
GGAGAAGCCCCGGACCCCCATGCCTAGCTCGGTGGAAGCCGAAAGGACAGACACAGCTGTGCAGGCCACTGGCTCTGTAC
CATCCACTCCCATAGCTCATCGGGGACCCAGCACTAGCTTAAACACACCAGGGACGTTCAGACGCGACCCAGGTCTGGAC
GACTCTATGGGTGGGACTCCCCTCACTCCTGCAGCACGGATATCGGCCCTCAACATTGTGGGAGACCTGCTTCGGAAAGT
AGGGGCCCTGGAGTCCAAACTTGCGTCCTGCCGGAATTTTGTGTATGATCAGTCCCCAAATCGAACAAGTGGCCCAGCCT
CCGGGCGGGGGAGCAAGCACAGAGATGGCAGTGAGAGACAGCCAAGCAGCACCGGCGTGCCTCTGGGTGATAAAGGGTTG
GGAAAACGCCTGGAATTTGGGAAGCCGCCTTCAAATATTTCCTCACCGTCGCTGCCGTCAGCCCAGGGTGTAGTCAAGAT
GTTGCTTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 8 .02 RPM |
| SRP017611_kidney | 3 .17 RPM |
| SRP017611_liver | 1 .52 RPM |
| SRP012049_cerebellum | 5 .46 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000009557 | ortholog_one2many | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000006004 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000019614 | ortholog_one2one | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000019896 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000005260 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_1579 | 98.67 | 67.16 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000018722 retrocopies