Parental gene: | NDE1, ENSCPOG00000019614 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_4:37313458..37335810(-) |
>ENSCPOG00000019614
ATGGAGGACTCGGGAAAGACTTTCAGCTCTGAGGAAGAAGAAGCAAACTATTGGAAAGATCTAGCGATGACCTACAAGCA
GAGGGCAGAGAATACACAGGAGGAACTCCGCGAATTCCAGGAGGGTAGCCGAGAATATGAAGCTGAATTAGAGACACAGC
TGCAACAAATTGAAACTAGAAACCGAGACCTCTTGTCGGAGAATAACCGCCTTCGCATGGAGCTGGAAACTGTCAAGGAA
AAATTTGAAATGCAGCATTCTGAAGGCTACCGGCAGATCTCAGCTTTGGAAGATGACCTGGCACAGACGAAAGCCATTAA
AGATCAACTACAGAAATACATTAGGGAGCTGGAGCAAGCAAATGATGACTTGGAAAGAGCCAAACGAGCCACGATCATGT
CTTTGGAAGACTTTGAGCAGCGATTGAATCAAGCCATTGAAAGAAATGCCTTCCTGGAAAGTGAACTTGATGAAAAGGAG
AATCTCCTAGAATCTGTTCAGCGACTGAAGGATGAAGCTAGAGGCACAGATTTGCGGCAGGAATTGGCTGTGCAACAGAA
GCAAGAGAAGCCCAGGACACCCATGCCCAGTGCGGTGGAAGCCGAAAGGACAGACATAGCTGTACAGGCCACAGGCTCTG
TGCCGTCCACTCCTATTGCTCATCGAGGACTCGGCTCTGCTTTAAACACCCCAGGGACATTCAGGCGTGCACAACCAGGC
TTGGATAGCTCCAGCAGTGGGACTCCTCTGACGCCTGCGGCCCGGATTTCAGCCCTCAACATTGTGGGGGACCTGCTGCG
GAAAGTTGGGGCTCTGGAGTCCAAACTTGCATCCTGCCGGAACTTTGTGTATGATCAGTCTCCAAACCGGATGAGTGGCC
CGGCCTCAGGGCGGGGGAGCAAGAACAGAGATGGCAGCGGAGGTGACAGAAGGACAAGCGGCAACGGCGTACCTTTGGGT
GACAAAGGGTTGGGAAAACGCCTGGAATTTGGGAAGCCACCCTCACAGCCATCCTCGCCAGCGCTGCCGCTGCTGTCTGC
CCAGGGGGTTGTCAAGCTGTTGCTTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 22 .72 RPM |
| SRP017611_kidney | 13 .50 RPM |
| SRP017611_liver | 8 .84 RPM |
| SRP040447_lung | 43 .38 RPM |
| SRP040447_skeletal_muscle | 16 .23 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000009557 | ortholog_one2many | 1 retrogene | |
| Canis familiaris | ENSCAFG00000018722 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000006004 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000012878 | within_species_paralog | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000019896 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000005260 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_875 | 72.41 | 56.90 | Please wait, loading  |
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| 2. | retro_cpor_876 | 71.74 | 51.55 | Please wait, loading |
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Download FASTA sequences of all ENSCPOG00000019614 retrocopies