Parental gene: | CAPZA1, ENSCHOG00000004131 |
| Aliases: | None |
| Description: | capping protein (actin filament) muscle Z-line, alpha 1 [Source:HGNC Symbol;Acc:1488] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | GeneScaffold_92:60667..88788(+) |
>ENSCHOG00000004131
ATGGCCGACTTTGAGGATCGGGTGTCGGATGAGGAGAAGGTACGCATAGCTGCTAAATTCATCACTCATGCACCCCCAGG
GGAATTTAATGAAGTGTTTAATGATGTTCGGCTACTACTTAATAATGACAATCTTCTCAGGGAAGGGGCAGCACATGCAT
TTGCCCAATATAACATGGATCAGTTCACACCTGTGAAGATAGAAGGATATGACGATCAGGTCTTAATTACAGAACATGGT
GACCTGGGTAATAGCAGATTTTTAGATCCAAGAAACAAAGTTTCCTTTAAGTTTGATCACTTACGGAAAGAAGCAAGTGA
CCCCCAACCAGAGGAAGTAGATGGAGGTCTGAAGTCTTGGAGAGAATCCTGTGACAGTGCATTAAGGGCCTATGTGAAAG
ATCATTATTCCAACGGCTTCTGTACTGTTTACGCTAAAACTATAGATGGGCAACAGACAATTATTGCATGTATTGAAAGC
CACCAGTTTCAGCCTAAAAACTTCTGGAATGGCCGTTGGAGATCAGAGTGGAAGTTCACCATCACACCACCTACAGCCCA
GGTGGTTGGAGTACTTAAGATTCAGGTTCACTATTATGAAGATGGCAATGTTCAATTGGTTAGTCATAAAGATGTACAGG
ATTCAATATCTGTTTCGAATGAAGTCCAAACTGCCAAGGAGTTTATTAAAATCATAGAGCATGCAGAAAATGAGTATCAG
ATGGCCGACTTTGAGGATCGGGTGTCGGATGAGGAGAAGGTACGCATAGCTGCTAAATTCATCACTCATGCACCCCCAGG
GGAATTTAATGAAGTGTTTAATGATGTTCGGCTACTACTTAATAATGACAATCTTCTCAGGGAAGGGGCAGCACATGCAT
TTGCCCAATATAACATGGATCAGTTCACACCTGTGAAGATAGAAGGATATGACGATCAGGTCTTAATTACAGAACATGGT
GACCTGGGTAATAGCAGATTTTTAGATCCAAGAAACAAAGTTTCCTTTAAGTTTGATCACTTACGGAAAGAAGCAAGTGA
CCCCCAACCAGAGGAAGTAGATGGAGGTCTGAAGTCTTGGAGAGAATCCTGTGACAGTGCATTAAGGGCCTATGTGAAAG
ATCATTATTCCAACGGCTTCTGTACTGTTTACGCTAAAACTATAGATGGGCAACAGACAATTATTGCATGTATTGAAAGC
CACCAGTTTCAGCCTAAAAACTTCTGGAATGGCCGTTGGAGATCAGAGTGGAAGTTCACCATCACACCACCTACAGCCCA
GGTGGTTGGAGTACTTAAGATTCAGGTTCACTATTATGAAGATGGCAATGTTCAATTGGTTAGTCATAAAGATGTACAGG
ATTCAATATCTGTTTCGAATGAAGTCCAAACTGCCAAGGAGTTTATTAAAATCATAGAGCATGCAGAAAATGAGTATCAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000003570 | possible_ortholog | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000004925 | within_species_paralog | 2 retrogenes | |
| Latimeria chalumnae | ENSLACG00000017963 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000070372 | possible_ortholog | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000000270 | possible_ortholog | 6 retrogenes | |
| Rattus norvegicus | ENSRNOG00000013538 | possible_ortholog | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000015956 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_625 | 89.26 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_711 | 70.14 | 90.42 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_chof_1008 | 72.13 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_chof_1419 | 90.04 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_chof_1499 | 73.66 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_chof_1704 | 71.88 | 66.67 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_chof_1861 | 74.88 | 89.58 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_chof_2129 | 52.27 | 70.83 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000004131 retrocopies