Parental gene: | FAM175B, ENSCHOG00000007635 |
| Aliases: | None |
| Description: | family with sequence similarity 175, member B [Source:HGNC Symbol;Acc:28975] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | GeneScaffold_5802:2875..28027(+) |
>ENSCHOG00000007635
GAAGGTTTTTTGCTGGGAGAGGTAAAACAAGAAGAAACCTTTAGCATCAGTGACTCACAAATCAGCAACACAGAATTTCT
GCAAGTAATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGTTATTGGGTGGTACAGATTTCGGCGAAACACACAGCAGCAG
ATGTCATACAGAGAGCAGGTCATCCACAAGCAGCTCACCCGGATTCTCGGCGTACCTGACCTTGTCTTCCTTCTCTTCAG
CTTCATCTCCACTGCCAACAATTCTACTCATGCTTTAGAATACGTTCTCTTTAGACCAAATCGAAGGTATAATCAAAGGA
TATCACTTGCTATTCCCAACCTAGGTAATACTAGCCAGCAGGAGTACAAAGTGTCTTCAGTGCCAAATACTTCTCAGAGT
TATGCCAAAGTTATTAAAGAACATGGTACCGACTTTTTTGACAAGGATGGAGTAATGAAAGACATCAGGGCGATTTATCA
GGTTTATAACGCACTTCAGGAGAAAGTACAGGCAGTGTGTGCAGATGTAGAAAAGAGTGAGCGAGTTGTTGAATCTTGTC
AGGCAGAAGTGAACAAATTAAAAAGACAGATCACTCAAAGGAAAAATGAAAAGGAACAGGAAAGAAGATTGCAGCAGACA
ATGTTAAGCAGACAGATGCCACCTGAAAGTTTGGAACCAGTGTTCAGCCCTCGGATGCCCTATTCCGGGTTTGCAGCCGA
AGGTAGAATTACACTTGGAGATGCAGAGGCTACCGATCCTCCTCCCCCTTATTCTGATTTTAACCCAAACAATCAAGAAA
GTACTTTAAGCCATTCTCGCGTGGAAAGTAGTGTCTTTATGCCTCGACCTCAAGCCGTGGGTTCCTCCAATTATGCTTCC
ACCAGTGCTGGACTGAACTATCCTGGATATGGAGCAGAACTTTCTCCTTCCCAAAGAGCAGCTGGAGACAGTGTTGATGA
ATCAGACAACAGCGTTTATGAGAATTTGATTGACCCTACAGAGCCCTCTAATAGTGAATCCTCCCATCCGAGGGATTCAC
GGCCCACGACACATTCTGATGGACACTCCAGGAACACTCAGGCCTCCCAGATTTAA
GAAGGTTTTTTGCTGGGAGAGGTAAAACAAGAAGAAACCTTTAGCATCAGTGACTCACAAATCAGCAACACAGAATTTCT
GCAAGTAATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGTTATTGGGTGGTACAGATTTCGGCGAAACACACAGCAGCAG
ATGTCATACAGAGAGCAGGTCATCCACAAGCAGCTCACCCGGATTCTCGGCGTACCTGACCTTGTCTTCCTTCTCTTCAG
CTTCATCTCCACTGCCAACAATTCTACTCATGCTTTAGAATACGTTCTCTTTAGACCAAATCGAAGGTATAATCAAAGGA
TATCACTTGCTATTCCCAACCTAGGTAATACTAGCCAGCAGGAGTACAAAGTGTCTTCAGTGCCAAATACTTCTCAGAGT
TATGCCAAAGTTATTAAAGAACATGGTACCGACTTTTTTGACAAGGATGGAGTAATGAAAGACATCAGGGCGATTTATCA
GGTTTATAACGCACTTCAGGAGAAAGTACAGGCAGTGTGTGCAGATGTAGAAAAGAGTGAGCGAGTTGTTGAATCTTGTC
AGGCAGAAGTGAACAAATTAAAAAGACAGATCACTCAAAGGAAAAATGAAAAGGAACAGGAAAGAAGATTGCAGCAGACA
ATGTTAAGCAGACAGATGCCACCTGAAAGTTTGGAACCAGTGTTCAGCCCTCGGATGCCCTATTCCGGGTTTGCAGCCGA
AGGTAGAATTACACTTGGAGATGCAGAGGCTACCGATCCTCCTCCCCCTTATTCTGATTTTAACCCAAACAATCAAGAAA
GTACTTTAAGCCATTCTCGCGTGGAAAGTAGTGTCTTTATGCCTCGACCTCAAGCCGTGGGTTCCTCCAATTATGCTTCC
ACCAGTGCTGGACTGAACTATCCTGGATATGGAGCAGAACTTTCTCCTTCCCAAAGAGCAGCTGGAGACAGTGTTGATGA
ATCAGACAACAGCGTTTATGAGAATTTGATTGACCCTACAGAGCCCTCTAATAGTGAATCCTCCCATCCGAGGGATTCAC
GGCCCACGACACATTCTGATGGACACTCCAGGAACACTCAGGCCTCCCAGATTTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000023840 | ortholog_one2many | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000013241 | within_species_paralog | 1 retrogene | |
| Equus caballus | ENSECAG00000023340 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_1691 | 73.39 | 54.73 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_2426 | 90.83 | 83.38 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_chof_2563 | 80.69 | 65.47 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000007635 retrocopies