Parental gene: | CKAP2, ENSCHOG00000009905 |
| Aliases: | None |
| Description: | cytoskeleton associated protein 2 [Source:HGNC Symbol;Acc:1990] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | GeneScaffold_3597:238..16119(+) |
>ENSCHOG00000009905
GAGAGCCTCCCGGCCGTGCCCCGAGACCTGCAGCTGCCGCCCAGTCAGGGGGCTTGGCCCGCGTTCCCAGAGCAAAGAAG
AGAAAACCTCAAGGAACTTCTTGAAGGAAAAACACGTTTTGTATACAAAGAGAAAGATCAGATATTATCCAGTAGTAAAG
ATCGGAGAATGATGACATCTGAACACCAGGTCCAAGAAAGGACAAAAGTTCTGAAACTTAAAACAAAAATGGCTGATAAG
GAAAATGCCAATAGACCTACAGAAAGCAAAAATATAATGACGGAAAAAAATTGTATTCCTTTACAACCTTCTAATGACTT
AACCAGTTTAACTATAGCAGTTGATACATATAATTTTGAGGATAATAATCAAATGCTTCAGTTGTTGCCAATTGAAGGTG
AGCCCCAAAATCAACGTATGACATTTACCCAGGCATTTCACTTAAAAAAAAAAAGCAAAGATAACCAAATGACTACAGAA
AAACTGAAGCAAGATGCTGCTAACATTCCCAAGAGACCTGTGCTGCTGGGATCTTACCGTGGCCAAATTGTTCAGTCTAA
GGTGAATTCATTTAGAAAACTTCTACAAGTCAAAGATGCGAGTTCTGCCACAACCCAGAAACTTTCAGCTACTGTCTCTG
AAGCCACAGAGCCTCAGCCTGTAAACACCAGCAGTGTAACAGTGAAAAGTAACAGCAACTCAAACAGAGCTACCACAAAA
TTTGTGAGCACTGCGTGTCAGGACAGACAGCTTATGCGACCTCCTATTAGAATTCACCACAGTAGTAACCAGGACAAGGT
GAAACAGGACATCAGCAGAACTTCTGCCAGGGTTACGGTCCAGAATGGGCCCACTGGAAAGGGGTTACTACAGTTAAAAA
CAGATTCATCTAGGGTCAAAATCAGTTCTTCTCAAGACACAAAAAGAAATGAGACATCATCAAGAAACCTGGGTTCTGAA
ATTATAACCAGGCCAGCTTCATCTACTAACAGAAAACTGATAGAAAAGTCCAAAACCATTGACCAGAGAAGACATACTGT
AGCCCAAGCAACCTTTGTTAGGTCAGCTCAGCCCAAAGAAACTGCAGAGGAGAGAAGAATCCGTCTGACTGAGTGGAAAG
CTGGCAGAGGAAGAGTGCTGAAAAGGCCTTCTAGTTCTGTACTTACCCAGCTAGAACCTGAAGGACAAAATGAAAACCCT
GTTGGGTCTTTCTGGACTACCATGGCGGAAGAGGACGAGCAGAGACTATTTACTGAAAAAGTAAACAAGATATTCTCTGA
ATGCCTGAACCTGATTAATGAGGGATGCCCAAAAGAAGAAGTATTGGCCACACTGAATGACCTGGTTAAAAATATTCCAG
ATGCCAAAAAACTTGTTAAATATTGGATATGCCTTGCACGTCTTGAACCAATTACAAGTTCTATTGAAAATATTATCACG
ATTTATGAGAAAGCCATTCTGGCAGGGGCTCNNCCTATTGAAGAGATGCGACATGCAATTGTAGATATTCTAACACTGAA
GAGTCAAGAAGAACTTAATTTTGGAGAAAAGACCAAGGCTTGTGCAGCCACGGAAGAAATCCAAGAAGTCAACACCGATA
ACATAGGTGTTAACCTAGAGCCAGGAAAACTGGAAATGGAAAATAAACAACCTAGAAATGTGATATTTCAAGATTGTGAA
GAACAAGAGGACAAAACAAAAGAGCCCATCAGTGATGCTAAAACCCCCAGTAAAGAAACTAGAGCAAGTTCCTTAATTAA
ATACAATATTTCTACCACACCATACTTGCAAAGTGTAAAAAAGAAGATGCAGTTTGATGAAACAAATTCTACATTTAAAA
AGCTGAAGTTTCTAACACCAGTAAGATGTTCTCGACATCTTCACGAGAACAATTCCAAATTCCCAGATATACTAAAAGAC
CATTATCCTTGTGAGTCTTCTTTGGAACAGTTGGCAGAAGTGGGAAACAAAACGGATGCTTCTGTCTGCCATCCTAATGC
AGCACTTGGCAGGATGTACTCAGAGGCTGAGGTAACAGAA
GAGAGCCTCCCGGCCGTGCCCCGAGACCTGCAGCTGCCGCCCAGTCAGGGGGCTTGGCCCGCGTTCCCAGAGCAAAGAAG
AGAAAACCTCAAGGAACTTCTTGAAGGAAAAACACGTTTTGTATACAAAGAGAAAGATCAGATATTATCCAGTAGTAAAG
ATCGGAGAATGATGACATCTGAACACCAGGTCCAAGAAAGGACAAAAGTTCTGAAACTTAAAACAAAAATGGCTGATAAG
GAAAATGCCAATAGACCTACAGAAAGCAAAAATATAATGACGGAAAAAAATTGTATTCCTTTACAACCTTCTAATGACTT
AACCAGTTTAACTATAGCAGTTGATACATATAATTTTGAGGATAATAATCAAATGCTTCAGTTGTTGCCAATTGAAGGTG
AGCCCCAAAATCAACGTATGACATTTACCCAGGCATTTCACTTAAAAAAAAAAAGCAAAGATAACCAAATGACTACAGAA
AAACTGAAGCAAGATGCTGCTAACATTCCCAAGAGACCTGTGCTGCTGGGATCTTACCGTGGCCAAATTGTTCAGTCTAA
GGTGAATTCATTTAGAAAACTTCTACAAGTCAAAGATGCGAGTTCTGCCACAACCCAGAAACTTTCAGCTACTGTCTCTG
AAGCCACAGAGCCTCAGCCTGTAAACACCAGCAGTGTAACAGTGAAAAGTAACAGCAACTCAAACAGAGCTACCACAAAA
TTTGTGAGCACTGCGTGTCAGGACAGACAGCTTATGCGACCTCCTATTAGAATTCACCACAGTAGTAACCAGGACAAGGT
GAAACAGGACATCAGCAGAACTTCTGCCAGGGTTACGGTCCAGAATGGGCCCACTGGAAAGGGGTTACTACAGTTAAAAA
CAGATTCATCTAGGGTCAAAATCAGTTCTTCTCAAGACACAAAAAGAAATGAGACATCATCAAGAAACCTGGGTTCTGAA
ATTATAACCAGGCCAGCTTCATCTACTAACAGAAAACTGATAGAAAAGTCCAAAACCATTGACCAGAGAAGACATACTGT
AGCCCAAGCAACCTTTGTTAGGTCAGCTCAGCCCAAAGAAACTGCAGAGGAGAGAAGAATCCGTCTGACTGAGTGGAAAG
CTGGCAGAGGAAGAGTGCTGAAAAGGCCTTCTAGTTCTGTACTTACCCAGCTAGAACCTGAAGGACAAAATGAAAACCCT
GTTGGGTCTTTCTGGACTACCATGGCGGAAGAGGACGAGCAGAGACTATTTACTGAAAAAGTAAACAAGATATTCTCTGA
ATGCCTGAACCTGATTAATGAGGGATGCCCAAAAGAAGAAGTATTGGCCACACTGAATGACCTGGTTAAAAATATTCCAG
ATGCCAAAAAACTTGTTAAATATTGGATATGCCTTGCACGTCTTGAACCAATTACAAGTTCTATTGAAAATATTATCACG
ATTTATGAGAAAGCCATTCTGGCAGGGGCTCNNCCTATTGAAGAGATGCGACATGCAATTGTAGATATTCTAACACTGAA
GAGTCAAGAAGAACTTAATTTTGGAGAAAAGACCAAGGCTTGTGCAGCCACGGAAGAAATCCAAGAAGTCAACACCGATA
ACATAGGTGTTAACCTAGAGCCAGGAAAACTGGAAATGGAAAATAAACAACCTAGAAATGTGATATTTCAAGATTGTGAA
GAACAAGAGGACAAAACAAAAGAGCCCATCAGTGATGCTAAAACCCCCAGTAAAGAAACTAGAGCAAGTTCCTTAATTAA
ATACAATATTTCTACCACACCATACTTGCAAAGTGTAAAAAAGAAGATGCAGTTTGATGAAACAAATTCTACATTTAAAA
AGCTGAAGTTTCTAACACCAGTAAGATGTTCTCGACATCTTCACGAGAACAATTCCAAATTCCCAGATATACTAAAAGAC
CATTATCCTTGTGAGTCTTCTTTGGAACAGTTGGCAGAAGTGGGAAACAAAACGGATGCTTCTGTCTGCCATCCTAATGC
AGCACTTGGCAGGATGTACTCAGAGGCTGAGGTAACAGAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000005898 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000012382 | ortholog_one2many | 1 retrogene | |
| Felis catus | ENSFCAG00000010021 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000000132 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000010436 | ortholog_one2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000017996 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000037725 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000008428 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000005807 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000009624 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_973 | 70.28 | 61.47 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_1493 | 76.83 | 59.85 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000009905 retrocopies