Parental gene:

ENSFCAG00000010021

Aliases:None
Description:None
Organism:Cat (Felis catus)
Coordinates:A1:19164379..19179814(+)


>ENSFCAG00000010021
AGGGCCGAGACGCGTCCTCCGCCCGCAGCAGCCATGAGCACCCCAGCAGTGCCCCGGGAGCTACAACTGCCCCCGAGCCA
GAGGGCCCAGCCCGAGTTCAGAGAACAAAGAAGACAGAAACTCAAGGAACATATGTTAAAAAGAAAAACGTTTTTTGCAT
ACAAGGAGGAAAATCACATATCCAGAGTTAGTAGAGACCAGAAAGTGATGACCTTGACCTCTGAGGGCCAGGTCCATGAA
GAGACAAAAGTTCTGAAATTTAAAACAAAAATGGCTGGTAAAGAAAATGTCAGTAGACCTCCCGGGAGCAAAAATAATGT
AACAATGGAAAAAAATTGTATTCCTCTAAGGCCTTCTAATGAACTAACCAATTCAACTATAGCAATTGATACACCTAATT
CTGAGGATAATAATCAAACTGGGCAGTTGGTACCAATTAAAGGTGACCCTCCAGGTCAACACATGACATTAAGCCAAGTG
TTTCATCTTAAAAACAACAATAAAAAGAAACAAATAATGACAGAAAAACCAAAGCAAGATGCTAACATATCCAAGAAGCT
TGTGCTTGGATCTTACCGTGGCCAAATTGTTCAGTCTAAGATTAATTCATTTAGAAAGCCTCTACAAATCAGAGATGAGA
GTTCTGCAGCAATAAAGAAACTTTCGACTGCAGTCCCTAAAGCTACAGAGCCTCTGCACACAAACAGCAGCAGTGTGACA
GCGAAAAGCGATAGAGCTTCTAACGTGACGACTACCACTAAACTTGTGAGCACTACAATTCAGAACAGACAGCTTCTGCG
ACCTCCTATTAGAAGTCACCACGACAATGCTCAGGACGCTGTGAGACCAGGCATCGGTAGAAGCTCGGCCAATGTTACGA
TGCGGAAAGGACCTCGGGAGAAAGAGTTAGTGCAATTAAACACAGTTTCATCTAGTGCCAAAACCGGTTCTCAGGATATA
GAAAGAAAGAAGACACTAACAAGAAGCGTGAAGTCTGAAATTGTAGCCAGGCCTGTTTTGTCTTCTAACACCAAACTGAT
AGAAAAGTCGAAAAACGTTGACCCTCGCAGACATACAATAGCAAAAGCAACTATTGATAGATCAGCTCAGCCCAAAGAAA
CAGCAGAAGAGAGAAAAGCTCGTCTGAGTGAGTGGAAAGCTGGCAAAAGGAAAGTCCTGAAAAGGCCTCCTAGCTCAGGA
GTTACCCAGCCTGAGCCTGAAGGGCAACACAAAAACCCAGTTGGGTCCTTTTGGACTACCATGGTAGAAGAAGATGAACA
AAGATTATTTACCGAAAAAGTGAACAAGACATTTTCTGAATGCCTAAACCTGATTAGTGAGGGATGCCCAAAAGAAGAAA
TATTGGTCATACTGAATGACCTGATTAAAAATATTCCGGATGCCAAAAAGCTTGTTAAATATTGGATATGCCTTGCACGT
ATTGAACCACTCACAAGTCCTATTGAAAACATTATCACAATCTATGAGAAAGCCATTCTGGCGGGCGCTCAGCCTATTGA
AGAGATGCGACATACCATTGCAGATATTCTGACAATGAAGAGTCAAGAAAAGAAATGTATTTCTATAGGAGAAAATATTG
AGGAGGCTTGTGCAACCAAGGAATACATCCATGAAGTCAGCACTGAAGATAGAGGGGTTAATCTAGAGTCAGGAAAACCA
GAAATGGAAAAGAAAACTAGAAATGTGGTATTCCAAGATGATGAAAAAGAGCAAGACGACAAAACAAACAATTCAACCAA
TGATGTTAAAACCCCCAGTACAGAAACCAGGGGGAGTTGTTTAATTAAATATAATGTGTCTACTACACCATACCTACAAA
GTGTAAAAAAGAAGATACAGTTTGACAATACAGATTCTACATTTAAAGAGCTAAAGTTTCTAACACCAGTGAGACGTTCT
CGACGTATTCAAGAGAAGACTTCTAAATTGCCAGATATGTTAAAAGACCATTATCCTTGTGTGTCTTCATTGGAACAATT
AACAGAGTTGGGAGGGGAAACTGATGCTTTCGTATGCCGTCCCAATTCAGCACTATGCCCGATGTTCTCAGAGCCTGGAA
CAGCAGAAGAGAAATAA

Library Parental gene expression (RPM)
SRP017611_liver 0 .61 RPM
SRP017611_kidney 1 .44 RPM
SRP017611_brain 2 .07 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000005898 ortholog_one2many 1 retrogene
retro_cfam_968,
Choloepus hoffmanni ENSCHOG00000009905 ortholog_one2many 2 retrogenes
retro_chof_1493, retro_chof_973,
Cavia porcellus ENSCPOG00000012382 ortholog_many2many 1 retrogene
retro_cpor_171,
Felis catus ENSFCAG00000028904 within_species_paralog 1 retrogene
retro_fcat_615,
Myotis lucifugus ENSMLUG00000000132 ortholog_many2many 1 retrogene
retro_mluc_1515,
Monodelphis domestica ENSMODG00000010436 ortholog_many2many 1 retrogene
retro_mdom_1364,
Mustela putorius furo ENSMPUG00000017996 ortholog_one2many 1 retrogene
retro_mputfur_1270,
Mus musculus ENSMUSG00000037725 ortholog_one2many 1 retrogene
retro_mmus_2651,
Otolemur garnettii ENSOGAG00000008428 ortholog_one2many 1 retrogene
retro_ogar_1743,
Tupaia belangeri ENSTBEG00000005807 ortholog_one2many 1 retrogene
retro_tbel_176,
Tursiops truncatus ENSTTRG00000009624 ortholog_one2many 2 retrogenes
retro_ttru_1491, retro_ttru_1741,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_1770 94.71 100.00
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Download FASTA sequences of all ENSFCAG00000010021 retrocopies