Parental gene: | HADHB, ENSCHOG00000010050 |
| Aliases: | None |
| Description: | hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit [Source:HGNC Symbol;Acc:4803] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | GeneScaffold_3796:3233..22731(+) |
>ENSCHOG00000010050
TTGATGTCTGTAACATTATATAAAGACTTGATGCCCCATGATTTGGCTAGAGCAGCACTTAGGGGATTGCTTCATCGGAC
CAGTGTCCCAAAGGAAACTATTGATTATATCGTCTTTGGTACAGTGATTCAGGAGGTGAAAACAAGCAATGTGGCCAGAG
AGGCTGCCCTCGGAGCCGGCTTCTCCGACAAGACTCCTGCCCACACCGTCACCATGGCCTGCATCTCTGCCAACCAAGCC
ATGACCACAGGTGTTGGCTTAATTGCTTCCGGCCAGTGTGACGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGCCGTGGCCGAGTTCTCCACCAGCGAGACCATGGGC
CACTCCGCAGACCGACTGGCTGCTGCCTTTGCCGTGCCCCGACGGGAACAGGACGAGTACGCGCTGCGCTCCCACAGTCT
GGCCAAGAAGGCACAGGATGAAGGGCTCCTGTCAGACGTGGTGCCCTTCAAAGTGCCAGGAAAAGATACAGTTACCAAAG
ATAATGGCATTCGTCCTTCCTCCCTGGAGCAGATGGCCAAGCTGAGGCCCGCATTCATCAAGCCCTATGGCACGGTGACG
GCTGCAAATTCTTCATTCCTGACTGATGGTGCCTCTGCCGTGCTGATGATGGCCGAGGAAAAGGCTCTGGCCATGGGGTA
CAAGCCCAAGGCCTATCTGAGGGATTTTGTATATGTATCTCAGGATCCAAAAGATCAACTTTTACTTGGACCAACATATG
CTACTCCAAAAGTTCTAGAGAGAGCAGGATTAACAATGAATGATGTTGATGCTTTTGAATTTCACGAAGCTTTCTCCNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCTGATTGGTTTGCGCAAAACTACATGGGCAGAAAAACCAAGGTTGGCCT
GCCTCCCATGGAGAAGTTTAACACTTGGGGCGGATCGCTGTCCCTGGGGCACCCGTTTGGAGCTACGGGCTGCCGGCTGG
TCATGGCCGCTGCCAACAGGTTACGGAAGGAAGGCGGCCAGTATGGCCTGGTGGCCGCCTGCGCGGCCGGAGGGCAGGGC
CATGCTATGATAGTGGAAGCTTATCCAAAATAA
TTGATGTCTGTAACATTATATAAAGACTTGATGCCCCATGATTTGGCTAGAGCAGCACTTAGGGGATTGCTTCATCGGAC
CAGTGTCCCAAAGGAAACTATTGATTATATCGTCTTTGGTACAGTGATTCAGGAGGTGAAAACAAGCAATGTGGCCAGAG
AGGCTGCCCTCGGAGCCGGCTTCTCCGACAAGACTCCTGCCCACACCGTCACCATGGCCTGCATCTCTGCCAACCAAGCC
ATGACCACAGGTGTTGGCTTAATTGCTTCCGGCCAGTGTGACGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGCCGTGGCCGAGTTCTCCACCAGCGAGACCATGGGC
CACTCCGCAGACCGACTGGCTGCTGCCTTTGCCGTGCCCCGACGGGAACAGGACGAGTACGCGCTGCGCTCCCACAGTCT
GGCCAAGAAGGCACAGGATGAAGGGCTCCTGTCAGACGTGGTGCCCTTCAAAGTGCCAGGAAAAGATACAGTTACCAAAG
ATAATGGCATTCGTCCTTCCTCCCTGGAGCAGATGGCCAAGCTGAGGCCCGCATTCATCAAGCCCTATGGCACGGTGACG
GCTGCAAATTCTTCATTCCTGACTGATGGTGCCTCTGCCGTGCTGATGATGGCCGAGGAAAAGGCTCTGGCCATGGGGTA
CAAGCCCAAGGCCTATCTGAGGGATTTTGTATATGTATCTCAGGATCCAAAAGATCAACTTTTACTTGGACCAACATATG
CTACTCCAAAAGTTCTAGAGAGAGCAGGATTAACAATGAATGATGTTGATGCTTTTGAATTTCACGAAGCTTTCTCCNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCTGATTGGTTTGCGCAAAACTACATGGGCAGAAAAACCAAGGTTGGCCT
GCCTCCCATGGAGAAGTTTAACACTTGGGGCGGATCGCTGTCCCTGGGGCACCCGTTTGGAGCTACGGGCTGCCGGCTGG
TCATGGCCGCTGCCAACAGGTTACGGAAGGAAGGCGGCCAGTATGGCCTGGTGGCCGCCTGCGCGGCCGGAGGGCAGGGC
CATGCTATGATAGTGGAAGCTTATCCAAAATAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000002288 | ortholog_one2many | 1 retrogene | |
| Canis familiaris | ENSCAFG00000029395 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000138029 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000025829 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000006750 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000059447 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000005444 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000012582 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000011733 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000003570 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_122 | 95.44 | 64.15 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_911 | 93.16 | 64.15 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_chof_1869 | 82.26 | 64.15 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000010050 retrocopies