Parental gene:

HADHB, ENSTSYG00000003570

Aliases:None
Description:hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit [Source:HGNC Symbol;Acc:4803]
Organism:Tarsier (Tarsius syrichta)
Coordinates:GeneScaffold_3944:3644..35350(+)


>ENSTSYG00000003570
ATGACTACCATCTTGACTTACTCTTTTAAAAATCTTCCCAGTACATCAAAATGGGCCCTAATTCCACCACATTCTTTAAG
ACCTCTGAGCTGTTCCTCCCAGGTAAGAGCTGCCCCAGCTGTCCAGACCAAATCAAAGAAGACCTTAGCCAAACCCAATA
TAAGGAATATTGTGGTGGTGGATGGTGTTCGCACTCCATTTTTGCTGTCAGGTACTTCATATAAAGACCTGATGCCACAT
GACTTGGCTAGAGCAGCACTTACGGGTTTGTTACATCGGACCAATGTCCCAAAGGAAGTTGTTGATTATATCATCTTTGG
CACAGTTATTCAGGAGGTAAAAACAAGCAACGTGGCTAGAGAGGCTGCCCTTGGAGCTGGCTTCTCTGATAAGACTCCTG
CTCACACTGTCACCATGGCTTGCATCTCTGCCAACCAAGCCATGACCACAGGTGTTGGCTTGCTTACCTCTGGCCAGTGT
GATGTGATTGTGGCCGGTGGTGTCGAATTAATGTCCGATGTTCCTATTCGTCATTCAAGGAAAATGAGGAAAATGATGCT
TGATCTCAACAAGGCCAAGACTCTGGGCCAGCGACTATCTTTACTCTCTAAATTCAGATTGAATTTTCTATCACCTGAGC
TCCCTGCGGTGGCTGAGTTTTCCACCAGCGAGACGATGGGCCACTCTGCAGACCGACTGGCCGCTGCCTTTGCTGTTTCT
CGACTGGAACAGGATGAATATGCACTGCGCTCTCACAGTCTGGCCAAGAAGGCACAGGATGAAGGACTCCTTTCTGACGT
TGTACCCTTCAGTGTACCAGGAAAAGATACAATTACTAAAGATAATGGCATCCGTCCTTCCTCACTGGAACAGATGGCCA
AACTAAAACCTGCGTTCATCAAGCCCTATGGCACAGTGACAGCTGCAAACTCTTCTTTCTTGACTGACGGTGCATCTGCA
ATGCTGATTATGGCAGAGGAAAAAGCTCTGGCCATGGGTTATAAGCCGAAGGCATATCTGAGGGACTTCATGTATGTGTC
TCAGGATCCAAAAGATCAACTATTACTTGGACCAACATATGCTACTCCAAAAGTCCTAGAAAAGGCAGGATTAACCATGA
ATGATATTGATGCTTTTGAATTTCACGAAGCTTTCTCAGGTCAGATTTTGGCTAATTTTAAAGCCATGGATTCTGATTGG
TTTGCGCAAAACCACATGGGTAGAAAAACCAAGGTTGGATTGCCTCCCTTGGAGAAATTCAATAACTGGGGTGGATCGCT
GTCCCTTGGACACCCGTTTGGAGCCACTGGCTGCCGGTTGGTCATGGCAGCTGCCAACAGATTACGGAAGGAAGGAGGCC
AGTATGGCTTAGTGGCTGCCTGTGCAGCTGGAGGACAGGGCCATGCTATGATAGTGGAAGCTTATCCAAAATAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000002288 ortholog_one2many 1 retrogene
retro_amel_1473,
Canis familiaris ENSCAFG00000029395 ortholog_one2many 1 retrogene
retro_cfam_2114,
Choloepus hoffmanni ENSCHOG00000010050 ortholog_one2one 3 retrogenes
retro_chof_122, retro_chof_1869, retro_chof_911,
Homo sapiens ENSG00000138029 ortholog_one2one 1 retrogene
retro_hsap_4778,
Gorilla gorilla ENSGGOG00000025829 ortholog_one2one 1 retrogene
retro_ggor_2976,
Microcebus murinus ENSMICG00000006750 ortholog_one2one 1 retrogene
retro_mmur_1315,
Mus musculus ENSMUSG00000059447 ortholog_one2one 2 retrogenes
retro_mmus_1427, retro_mmus_1961,
Otolemur garnettii ENSOGAG00000005444 ortholog_one2many 1 retrogene
retro_ogar_167,
Pongo abelii ENSPPYG00000012582 ortholog_one2one 1 retrogene
retro_pabe_3718,
Pan troglodytes ENSPTRG00000011733 ortholog_one2one 1 retrogene
retro_ptro_3180,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tsyr_1316 95.49 51.15
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2. retro_tsyr_1951 85.71 72.75
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Download FASTA sequences of all ENSTSYG00000003570 retrocopies