Parental gene:

NAB1, ENSCJAG00000005748

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:6:105845318..105891013(+)


>ENSCJAG00000005748
ATGGCTACGGCCTTACCCAGGACTCTGGGCGAGTTGCAGCTGTATAGAATATTACAAAAAGCCAACCTACTTTCTTATTT
TGATGCCTTTATCCAGCAAGGTGGTGATGATGTCCAGCAGCTCTGTGAAGCAGGAGAAGAGGAGTTTTTGGAAATCATGG
CACTCGTGGGCATGGCTAGCAAGCCTCTTCATGTTAGAAGGCTGCAGAAGGCTTTAAGAGACTGGGTCACAAACCCTGGG
CTTTTCAATCAGCCGCTGACTTCCCTTCCTGTCAGTAGCATTCCCATCTATAAATTACCAGAGGGATCGCCAACATGGCT
GGGAATATCCTGCAGTAGTTATGAAAGGAGTAGCAATGCCCGGGAACCTCATTTAAAAATCCCCAAATGTGCTGCCACCA
CCTGTGTGCAGAGCTTGGGACAGGCGAAGTCAGATGTGGTCGGGAGCCTAGCACTGCAGAGTGTTGGTGATTCCAGACTC
TGGCAAGGCCACCATGCTACTGAGAGCGAGCACAGCCTCTCCCCAGCAGACCTGGGCTCCCCTGCATCCCCAAAGGAGAG
CAGCGAGGCGCTGGATGCTGCTGCTGCGCTCTCTGTGGCCGAGTGTGTGGAGAGGATGGCCCCCACACTGCCGAAAAGTG
ACTTGAATGAAGTGAAAGAGCTGCTAAAAACCAACAAGAAGTTGGCCAAAATGATTGGTCACATCTTTGAGATGAACGAT
GATGATCCACACAAAGAAGAGGAAATTCGGAAATACAGTGCAATATATGGCAGATTTGACTCAAAGAGGAAGGATGGGAA
ACATCTCACACTCCATGAGCTCACTGTTAATGAAGCAGCTGCTCAACTCTGTGTGAAGGATAATGCCCTGCTGACAAGAA
GAGATGAGCTCTTTGCCTTGGCTAGGCAGATTTCTCGAGAAGTCACCTATAAATATACATACAGAACCACCAAGTCAAAA
TGTGGAGAAAGAGATGAATTATCCCCGAAGAGAATTAAAGTGGAGGATGGGTTTCCAGATTTCCAAGATTCTGTGCAAAC
GCTCTTCCAGCAGGCTAGAGCTAAGAGTGAAGAACTCACAGCTCTTAATTCACAGCAGCCTGAGAAGGTGATGGCAAAGC
AGATGGAGTTCCTTTGCAACCAAGCTGGCTATGAGAGACTGCAGCATGTCGAGAGGAGGTTGTCTACAGGGCTTTACAGG
CAGAGCTCAGAAGAGCACAGTCCTAATGGCTTGACTTCTGATAACTCAGATGGACAAGGAGAAAGACCTTTGAATCTCCG
CATGCCTAATTTACAGAACAGACAACCCCATCATTTTGTGGTGGATGGGGAGCTGAGCAGACTTTACCCCAGTGAGGCAA
AGTCCCACTCATCAGAGAGCCTTGGGATTTTAAAAGACTACCCTCACTCAGCTTTTACCTTAGAAAAGAAAGTCATCAAA
ACAGAGCCTGAAGATTCAAGATAG

Library Parental gene expression (RPM)
SRP051959_colon 21 .10 RPM
SRP051959_heart 26 .43 RPM
SRP051959_kidney 48 .06 RPM
SRP051959_liver 14 .84 RPM
SRP051959_lung 30 .49 RPM
SRP051959_lymph_node 24 .25 RPM
SRP051959_skeletal_muscle 6 .84 RPM
SRP051959_spleen 26 .01 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000010241 ortholog_one2one 1 retrogene
retro_chof_2490,
Gorilla gorilla ENSGGOG00000013842 ortholog_one2one 1 retrogene
retro_ggor_3068,
Microcebus murinus ENSMICG00000007306 ortholog_one2one 2 retrogenes
retro_mmur_1155, retro_mmur_1211,
Nomascus leucogenys ENSNLEG00000006665 ortholog_one2one 1 retrogene
retro_nleu_2288,
Pongo abelii ENSPPYG00000013025 ortholog_one2one 1 retrogene
retro_pabe_3822,
Ictidomys tridecemlineatus ENSSTOG00000000098 ortholog_one2one 1 retrogene
retro_itri_1621,
Tupaia belangeri ENSTBEG00000011954 ortholog_one2one 1 retrogene
retro_tbel_3626,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_4224 84.36 92.61
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Download FASTA sequences of all ENSCJAG00000005748 retrocopies