Parental gene:

CIR1, ENSCJAG00000007884

Aliases:None
Description:corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:24217]
Organism:Marmoset (Callithrix jacchus)
Coordinates:6:44032072..44081593(+)


>ENSCJAG00000007884
ATGGGGAAATCCTTCGCCAACTTCATGTGCAAGAAGGACTTTCATCCTGCCTCCAAATCCAATATCAAAAAAGTATGGAT
GGCAGAACAGAAAATATCATACGATAAGAAGAAACAAGAAGAATTAATGCAGCAATATCTTAAAGAACAAGAATCATATG
ATAATAGATTGCTTATGGGAGATGAACGTGTAAAGAATGGCCTTAATTTCATGTATGAAGCCCCACCAGGAGCCAAGAAA
GAGAAAGAAGAAACAGAGGGAGAGACTGAATACAAATTTGAATGGCAGAAAGGAGCCCCACGAGAAAAATATGCCAAAGA
TGACATGAACATCAGAGATCAGCCCTTTGGTATTCAGGTTCGAAATGTGAGGTGCATTAAATGTCACAAATGGGGTCATG
TTAACACAGATCGAGAGTGTCCTTTGTTTGGTCTTTCTGGAATCAACGCAAGTTCGGTTGCCACTGATGGCTCAGGGCCA
TCGATGCACCCCTCGGAGCTAATAGCGGAGATGAGAAACAGTGGGTTTGCACTAAAACGAAATGTACTGGGGAGAAACTT
GACCGCAAATGATCCATCACAGGAGTATGTTGCAAGTGAGGGTGAAGAAGATCCAGAAGTTGAATTTTTAAAGTCACTAA
CAACCAAACAAAAACAGAAACTTCTCAGGAAGTTAGATCGACTGGAGAAGAAAAAAAAGAAAAAAGATCGAAAAAAGAAG
AAAAAGCTTCAGAAGAGCAGAAGTAAACACAAAAAACATAAATCCTCTTCCTCTTCCTCTACTGAGACTTCAGAAAGCAG
TAGTGAGAGTGAGAGTGACAATAAAGAAAAAAAAATAGAAAGGAAGAAGAGAAAGAAAAGCAAGTGTTCAGTGCAGAACA
GCAGTGATTCTGAAGAGAAGTCTAAGAAGAGAACACTTCATGAAGAACTTTCCAGCAGTCACCATAACAAGGAAAAAGCC
AAGGAAAAGCCCAGGTTCTTAAAACACGAGAGTTGTAGGGAGAACAGCAAACGGAGCCATTCCAATTCTGACAAAAAGTC
CAGAAGCTGTAATCATAGCCCAGAGAAGAGAGGCTCTGAAAGAAATGAAGGGAGTGGCAGAAGCCACGGCAGGGATGAAA
GGAGCAGGAGAAGCCGGAGCAGAAGTCCTGGTAGTTATAAGCAAAGGGAGTTAAGAAAATGGCCACAGCGAAGTCCCACT
GAAGAGCAAAGTAGAAGAAATGACACCAGAAGCCATGGCGTAGATGTATACAGAGGGGGAAAAACGTACAGAGAGCACCC
AGGAGATAAGCATGCTAAAGTGACACAAAGAGAATGA

Library Parental gene expression (RPM)
SRP051959_spleen 25 .32 RPM
SRP051959_skeletal_muscle 30 .88 RPM
SRP051959_lymph_node 22 .10 RPM
SRP051959_lung 29 .30 RPM
SRP051959_liver 27 .21 RPM
SRP051959_kidney 26 .87 RPM
SRP051959_heart 28 .13 RPM
SRP051959_colon 10 .23 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000138433 ortholog_one2one 2 retrogenes
retro_hsap_3082, retro_hsap_3394,
Macaca mulatta ENSMMUG00000023006 ortholog_one2one 1 retrogene
retro_mmul_1967,
Mustela putorius furo ENSMPUG00000013943 possible_ortholog 1 retrogene
retro_mputfur_178,
Mus musculus ENSMUSG00000041777 ortholog_one2one 2 retrogenes
retro_mmus_2064, retro_mmus_3104,
Nomascus leucogenys ENSNLEG00000005869 ortholog_one2one 3 retrogenes
retro_nleu_1540, retro_nleu_2013, retro_nleu_2691,
Pan troglodytes ENSPTRG00000012652 ortholog_one2one 2 retrogenes
retro_ptro_2079, retro_ptro_2306,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2152 64.69 78.08
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Download FASTA sequences of all ENSCJAG00000007884 retrocopies