Parental gene:

CIR1, ENSPTRG00000012652

Aliases:None
Description:corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:24217]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:2B:178804073..178853234(-)


>ENSPTRG00000012652
ATGGGGAAATCCTTCGCCAACTTCATGTGCAAGAAAGACTTTCATCCTGCCTCCAAATCCAATATCAAAAAAGTATGGAT
GGCAGAACAGAAAATATCATATGATAAGAAGAAACAAGAAGAATTGATGCAGCAATATCTTAAAGAACAAGAATCATATG
ATAATAGATTGCTTATGGGAGATGAACGTGTAAAGAATGGCCTTAATTTCATGTATGAAGCCCCACCAGGAGCTAAAAAA
GGTACTTCTTCCAAAGAAGAAACAGAAGGAGAGACCGAATACAAATTTGAATGGCAGAAAGGAGCCCCACGAGAAAAATA
TGCCAAAGATGACATGAACATCAGAGATCAGCCCTTTGGTATTCAGGTTCGAAATGTGAGGTGCATTAAATGTCACAAAT
GGGGTCATGTCAACACAGATCGAGAATGTCCTTTGTTTGGTCTTTCTGGAATCAATGCAAGTTCGGTTCCCACTGATGGC
TCAGGGCCATCGATGCACCCCTCGGAGCTAATAGCGGAGATGAGAAACAGTGGGTTTGCACTGAAACGAAATGTACTGGG
GAGAAACTTGACCGCAAATGATCCATCACAGGAGTATGTTGCAAGTGAGGGTGAAGAAGATCCAGAAGTTGAATTTTTAA
AGTCACTAACAACCAAACAAAAACAGAAACTTCTCAGGAAATTAGATCGACTGGAGAAGAAAAAAAAGAAAAAAGATAGA
AAAAAGAAAAAGTTTCAGAAGAGCAGAAGTAAACACAAAAAACATAAGTCCTCTTCTTCCTCGTCTTCCTCCTCCTCCTC
CTCTTCCTCTACTGAGACTTCAGAAAGCAGTAGTGAGAGTGAGAGTAACAATAAAGAAAAAAAAATACAAAGGAAGAAAA
GAAAGAAAAACAAGTGTTCAGGGCATAACAACAGTGATTCTGAAGAGAAGGACAAGTCTAAGAAGAGAAAGCTTCATGAA
GAACTTTCTAGCAGTCACCGTAACCGGGAAAAAGCCAAGGAAAAGCCCAGGTTCTTAAAACACGAGAGTTCTAGGGAGGA
CAGCAAATGGAGCCATTCTGATTCTGACAAAAAGTCCAGAACCCATAAACACAGCCCAGAGAAGAGAGGCTCTGAAAGAA
AGGAGGGGAGCAGCAGAAGCCACGGCAGGGAGGAAAGGAGCCGGAGAAGCCGGAGCAGAAGTCCTGGTAGTTACAAGCAA
AGGGAGACAAGGAAACGGCCACAGCGAAATCCTGGTGAAGAGCAAAGCAGAAGAAATGACAGCAGAAGCCATGGCACAGA
CTTGTATAGAGGAGAAAAAATGTACAGAGAGCACCCAGGAGGTACACATACTAAAGTGACACAAAGAGAATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 18 .04 RPM
SRP007412_cerebellum 33 .81 RPM
SRP007412_heart 23 .58 RPM
SRP007412_kidney 22 .15 RPM
SRP007412_liver 16 .37 RPM
SRP007412_testis 105 .07 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000007884 ortholog_one2one 1 retrogene
retro_cjac_2152,
Homo sapiens ENSG00000138433 ortholog_one2one 2 retrogenes
retro_hsap_3082, retro_hsap_3394,
Macaca mulatta ENSMMUG00000023006 ortholog_one2one 1 retrogene
retro_mmul_1967,
Mustela putorius furo ENSMPUG00000013943 possible_ortholog 1 retrogene
retro_mputfur_178,
Mus musculus ENSMUSG00000041777 ortholog_one2one 2 retrogenes
retro_mmus_2064, retro_mmus_3104,
Nomascus leucogenys ENSNLEG00000005869 ortholog_one2one 3 retrogenes
retro_nleu_1540, retro_nleu_2013, retro_nleu_2691,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2079 79.74 51.33
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_ptro_2306 81.03 51.11
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPTRG00000012652 retrocopies