Parental gene:

CIR1, ENSMMUG00000023006

Aliases:None
Description:corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:24217]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:12:37971911..38018930(-)


>ENSMMUG00000023006
ATGGGGAAATCCTTCGCCAACTTCATGTGTAAGAAAGACTTTCATCCTGCCTCCAAATCCAACATCAAAAAAGTATGGAT
GGCAGAACAGAAAATATCATATGATAAGAAGAAACAAGAAGAATTGATGCAGCAATATCTTAAAGAACAAGAATCATATG
ATAATAGATTGCTTATGGGAGATGAACGTGTAAAGAATGGCCTTAATTTCATGTATGAAGCCCCACCAGGAGCTAAAAAA
GAAAACAAAGAGAAAGAAGAAACAGAAGGAGAGACCGAATACAAATTTGAATGGCAGAAAGGAGCCCCACGAGAAAAATA
TGCGAAAGATGACATGAACATCAGAGATCAGCCCTTTGGTATTCAGGCAATAGTTCGAAATGTGAGGTGCATTAAATGTC
ACAAATGGGGTCATGTCAACACAGATCGAGAATGTCCTTTGTTTGGTCTTTCTGGAATCAATGCAAGTTCGGTTCCTACT
GATGGCTCAGGGCCATCGATGCACCCCTCGGAGCTAATAGCGGAGATGAGAAACAGTGGGTTTGCACTGAAACGAAATGT
ACTGGGGAGAAACTTGACCGCAAATGATCCATCACAGGAGTATGTTGCAAGTGAGGGTGAAGAAGATCCAGAAGTTGAAT
TTTTAAAGTCACTAACAACCAAACAAAAACAGAAACTTCTCAGGAAATTAGATCGACTGGAGAAGAGAAAAAAGAAAAAA
GATAGAAAAAAGAAAAAGTTTCAGAAGAGCAGAAGTAAGCACAAAAAACATAAGTCCTCTTCTTCCTCCTCTTCCTCCTC
CTCCTCCTCCTCTTCCTCTACTGAGACTTCAGAAAGCAGTAGTGAGAGTGAGAGTGACAATAAAGAAAAAAAAATAGAAA
GGAAGAAAAGAAAGAAAAGCAAGTGTTCAGGGCATAACAACAGTGATTCTGAAGAGAAGGACAAGTCTAAGAAGAGAAAA
CTTCATGAAGAACTTTCTAGCAGTCACCATAACCGGGAAAAAGCCAAGGAAAAGCCCAGGTTCTTAAAACGCGAGAGTTC
TAGGGAGAACAGCAAATGGAGCCATTCCGATTCTGACAAAAAGTCCAGAAGCCGTCATCATAGCCCAGAGAAGAGAGGCT
CTGAAAGAAAGGAGGGGAGCAGCAGAAGCCATGGCAGGGAGGAAAGGAGCAGGAGAAGCCGGAGCAGAAGTCCTGGTAGT
TACAAGCAAAGGGAGATAAGAAAACGGCCACAGCGAAGTCCCAGTGCAGAGCAAAGCAGAAGAAATGACACCAGAAGCCA
TGGCACAGATGTGTACAGAGGAGAAAAAATGTACAGGAGATATGCATACTAA

Library Parental gene expression (RPM)
SRP007412_brain 29 .02 RPM
SRP007412_brain_prefrontal_cortex 14 .36 RPM
SRP007412_cerebellum 31 .38 RPM
SRP007412_heart 26 .38 RPM
SRP007412_kidney 24 .53 RPM
SRP007412_liver 5 .66 RPM
SRP007412_testis 49 .08 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000007884 ortholog_one2one 1 retrogene
retro_cjac_2152,
Homo sapiens ENSG00000138433 ortholog_one2one 2 retrogenes
retro_hsap_3082, retro_hsap_3394,
Mustela putorius furo ENSMPUG00000013943 possible_ortholog 1 retrogene
retro_mputfur_178,
Mus musculus ENSMUSG00000041777 ortholog_one2one 2 retrogenes
retro_mmus_2064, retro_mmus_3104,
Nomascus leucogenys ENSNLEG00000005869 ortholog_one2one 3 retrogenes
retro_nleu_1540, retro_nleu_2013, retro_nleu_2691,
Pan troglodytes ENSPTRG00000012652 ortholog_one2one 2 retrogenes
retro_ptro_2079, retro_ptro_2306,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1967 77.19 50.34
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Download FASTA sequences of all ENSMMUG00000023006 retrocopies