Parental gene: | Cir1, ENSMUSG00000041777 |
| Aliases: | None |
| Description: | corepressor interacting with RBPJ, 1 [Source:MGI Symbol;Acc:MGI:1914185] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 2:73283104..73312701(-) |
>ENSMUSG00000041777
ATGGGGAAGTCATTCGCCAATTTCATGTGTAAGAAGGACTTCCATCCTGCGTCCAAATCCAACATCAAGAAGGTATGGAT
GGCAGAACAGAAAATATCGTATGATAAAAAGAAACAAGAAGAATTAATGCAACAGTACCTTAAAGAGCAGGAGTCGTATG
ATAACAGATTGCTTATGGGAGATGAACGTGTGAAGAATGGCCTGAATTTCATGTACGAGGCCCCACCAGGAGTTAAGAAA
GAAAACAAAGAGAAAGAAGAAACGGAAGGAGAGACCGAGTACAAGTTTGAATGGCAGAAAGGCGCTCCGAGAGAAAAATA
TGCCAAAGATGACATGAACATCAGAGATCAGCCCTTTGGTATTCAGGTTCGAAATGTAAGGTGTATTAAATGTCACAAGT
GGGGCCATGTGAACACAGATCGAGAGTGTCCCTTGTTTGGTCTTTCTGGGATCAATGCAAGTTCAGTTCCTACTGATGGC
TCAGGGCCGTCGATGCACCCCTCGGAGCTAATAGCGGAGATGAGAAACAGTGGGTTTGCACTGAAACGAAATGTACTGGG
GAGAAACTTGACCGCAAATGATCCATCACAGGACTATGTCGCAAGTGACTGTGAAGAAGACCCTGAAGTTGAGTTCTTAA
AGTCGCTCACCACCAAGCAGAAGCAGAAGCTCCTCAGGAAATTGGATAGACTTGAAAAGAAAAAAAAGAAAAAGAAAAGT
GATAAGAAAAAGAAGAAGTTACAGAAGAGCAAAAATAAACACAAGAAACGTAAAAACAAATCCCCTTCCTCTTCCTCCTC
TTCCTCCTCTTCCTCCTCTTCCTCCTCCTCCTCCTCCTCTTCCTCTTCCTCCTCCTCGGAGACATCAGATAGCAGCAGTG
AGAGTGATAACAAAGAAAAGAAAAGAGAGAAAGAGAAGAGGAAGAAGAAGAAGAAAACCAAATGTTCTGAAAGTAAATCC
AGTGACTGTAAGGAGGACAAGCCTAAGAACATGCTTTACGAAGAACTTTCCAGCAGTCACAGTGACAGGGGAAAAGCCCA
GGAAAAATTAAGGTTTCCAAAACAAGAGAGTTCTGGGGAGAATAGCATGTGGGTCCATTCTGCTTCTGACCGGACATCCA
GAAGCCACCGGCACAGTCCAGAGAAGAAAGGGTCTGACAGAAATCGGGGAATCCGAAGTCGGAGCCGTAGCCGGGCTGAG
AGCAGCCGGCGAAGCAGAAGCAGGAGTCCTTACCGTCAGAAGCACAGGGAGGTGAGGAGCCGGCCACACCGGAGCCCTAG
TGAAGAGCAGAAGGGAAGAAAGGGCACCAGAAGCCATGGTGAAGGTGACCATAGAAGAGAGCACGTGCGCTGA
ATGGGGAAGTCATTCGCCAATTTCATGTGTAAGAAGGACTTCCATCCTGCGTCCAAATCCAACATCAAGAAGGTATGGAT
GGCAGAACAGAAAATATCGTATGATAAAAAGAAACAAGAAGAATTAATGCAACAGTACCTTAAAGAGCAGGAGTCGTATG
ATAACAGATTGCTTATGGGAGATGAACGTGTGAAGAATGGCCTGAATTTCATGTACGAGGCCCCACCAGGAGTTAAGAAA
GAAAACAAAGAGAAAGAAGAAACGGAAGGAGAGACCGAGTACAAGTTTGAATGGCAGAAAGGCGCTCCGAGAGAAAAATA
TGCCAAAGATGACATGAACATCAGAGATCAGCCCTTTGGTATTCAGGTTCGAAATGTAAGGTGTATTAAATGTCACAAGT
GGGGCCATGTGAACACAGATCGAGAGTGTCCCTTGTTTGGTCTTTCTGGGATCAATGCAAGTTCAGTTCCTACTGATGGC
TCAGGGCCGTCGATGCACCCCTCGGAGCTAATAGCGGAGATGAGAAACAGTGGGTTTGCACTGAAACGAAATGTACTGGG
GAGAAACTTGACCGCAAATGATCCATCACAGGACTATGTCGCAAGTGACTGTGAAGAAGACCCTGAAGTTGAGTTCTTAA
AGTCGCTCACCACCAAGCAGAAGCAGAAGCTCCTCAGGAAATTGGATAGACTTGAAAAGAAAAAAAAGAAAAAGAAAAGT
GATAAGAAAAAGAAGAAGTTACAGAAGAGCAAAAATAAACACAAGAAACGTAAAAACAAATCCCCTTCCTCTTCCTCCTC
TTCCTCCTCTTCCTCCTCTTCCTCCTCCTCCTCCTCCTCTTCCTCTTCCTCCTCCTCGGAGACATCAGATAGCAGCAGTG
AGAGTGATAACAAAGAAAAGAAAAGAGAGAAAGAGAAGAGGAAGAAGAAGAAGAAAACCAAATGTTCTGAAAGTAAATCC
AGTGACTGTAAGGAGGACAAGCCTAAGAACATGCTTTACGAAGAACTTTCCAGCAGTCACAGTGACAGGGGAAAAGCCCA
GGAAAAATTAAGGTTTCCAAAACAAGAGAGTTCTGGGGAGAATAGCATGTGGGTCCATTCTGCTTCTGACCGGACATCCA
GAAGCCACCGGCACAGTCCAGAGAAGAAAGGGTCTGACAGAAATCGGGGAATCCGAAGTCGGAGCCGTAGCCGGGCTGAG
AGCAGCCGGCGAAGCAGAAGCAGGAGTCCTTACCGTCAGAAGCACAGGGAGGTGAGGAGCCGGCCACACCGGAGCCCTAG
TGAAGAGCAGAAGGGAAGAAAGGGCACCAGAAGCCATGGTGAAGGTGACCATAGAAGAGAGCACGTGCGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 5 .30 RPM |
| SRP007412_cerebellum | 8 .38 RPM |
| SRP007412_heart | 3 .70 RPM |
| SRP007412_kidney | 6 .87 RPM |
| SRP007412_liver | 4 .67 RPM |
| SRP007412_testis | 27 .76 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000007884 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000138433 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000023006 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000013943 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000005869 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000012652 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_2064 | 92.21 | 51.33 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_3104 | 93.53 | 51.33 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000041777 retrocopies