Parental gene: | ENSCJAG00000016193 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 8:74746724..74786815(-) |
>ENSCJAG00000016193
ATGAATGCTGCGGCAGAAGCCGAGTTCAACATCCTCCTGGCCACCGACTCCTACAAGGTTACTCATTATAAACAATATCC
ACCCAACACAAGTAAAGTTTATTCCTACTTTGAATGCCGTGAAAAGAAGACAGAAAACTCCAAAGTAAGGAAGGTGAAAT
ACGAGGAAACAGTATTTTATGGGTTGCAGTACATTCTTAATAAGTACTTAAAAGGTAAAGTAATAACCAAAGAGAAAATC
CAAGAAGCCAAAGAGGTCTACAAAGAACATTTCCAAGATGATGTCTTTAATGAAAAGGGATGGAACTACATTCTTGAGAA
ATATGATGGGCATCTTCCAATAGAAGTAAAAGCTGTTCCTGAGGGTTCTGTCATTCCCAGAGGAAATGTTCTCTTCACAG
TGGAAAACACAGATCCAGAGTGTTACTGGCTTACAAATTGGATTGAGACTATTCTTGTTCAGTCCTGGTATCCAATCACA
GTGGCCACAAATTCTAGAGAGCAGAAGAAAATATTGGCCAAATATTTGTTAGAAACTTCTGGTAACTTAGATGGTCTGGA
ATACAAGTTACATGATTTTGGCTACAGAGGAGTCTCTTCCCAAGAGACTGCTGGCATAGGAGCATCTGCTCATTTGGTTA
ACTTCAAAGGAACAGATACAGTAGCAGGAATTGCTCTCATAAAAAAATATTATGGAACAAAAGATCCTGTTCCAGGCTAT
TCTGTTCCAGCAGCAGAACACAGTACCATAACAGCCTGGGGGAAAGACCATGAAAAAGATGCTTTTGAACATATAGTAAC
ACAGTTTTCATCAGTGCCTGTATCTGTGGTCAGCGATAGCTATGACATTTATAATGCGTGTGAGAAAATATGGGGTGAAG
ATCTAAGACATTTAATAGTATCCAGAAGTACAGAGGCACCACTAATAATCAGACCTGATTCTGGAAACCCTCTTGACACT
GTGTTAAAGGTTTTGGAGATTTTAGGTAAGAAGTTTCCTGTTACTGAGAACTCAAAGGGCTACAAGTTGCTGCCTCCTTA
TCTCAGAGTGATTCAAGGGGATGGAGTAGATATTAATACCTTACAAGAGATTGTAGAAGGCATGAAACTAAAAAAGTGGA
GTATTGAAAATGTTTCCTTCGGTTCTGGTGGAGCTTTGCTACAGAAGTTAACAAGAGATCTCTTGAATTGTTCCTTCAAG
TGTAGTTATGTTGTAACCAATGGCCTTGGGATTAACGTCTTCAAGGACCCAGTTGCTGATCCCAACAAAAGGTCCAAAAA
GGGCCGACTATCTTTACATAGGACACCAGCAGGAAATTTTGTTACACTGGAGGAAGGAAAAGGAGACCTTGAGGAATATG
GTCATGATCTTCTCCATACTGTCTTCAAGAATGGCAAGGTGACAAAAAGCTATTCATTTGATGAAGTAAGAAAAAATGCA
CAGCTGAATATTGAACTGGAAGCAGCACCTCATTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_colon | 44 .06 RPM |
| SRP051959_heart | 46 .48 RPM |
| SRP051959_kidney | 65 .72 RPM |
| SRP051959_liver | 234 .78 RPM |
| SRP051959_lung | 65 .69 RPM |
| SRP051959_lymph_node | 43 .88 RPM |
| SRP051959_skeletal_muscle | 108 .16 RPM |
| SRP051959_spleen | 72 .27 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000009226 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000105835 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000013417 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000018270 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000019571 | ortholog_one2many | 1 retrogene | |
| Takifugu rubripes | ENSTRUG00000016695 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1281 | 92.56 | 93.08 | Please wait, loading  |
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| 2. | retro_cjac_3877 | 94.06 | 65.17 | Please wait, loading |
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Download FASTA sequences of all ENSCJAG00000016193 retrocopies