Parental gene: | ENSPPYG00000018270 |
| Aliases: | None |
| Description: | None |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 7_random:11804883..11843589(-) |
>ENSPPYG00000018270
ATGAATGCTGCGGCAGAAGCCGAGTTTAACATCCTCCTGGCCACCGACTCCTACAAGGTTACTCACTATAAACAGTATCC
ACCCAACACAAGCAAAGTTTATTCCTACTTTGAATGCCGTGAAAAGAAGACAGAAAACTCCAAATTAAGGAAGGTGAAAT
ATGAGGAAACAGTATTTTATGGGTTGCAGTACATTCTTAATAAGTACTTAAAAGGTAAAGTAGTAACCAAAGAGAAAATC
CAGGAAGCCAAAGACGTCTACAAAGAACATTTCCAAGATGATGTCTTTAATGAAAAGGGATGGAACTACATTCTTGAGAA
ATATGATGGGCATCTTCCAATAGAAATAAAAGCTGTTCCTGAGGGTTTTGTCATTCCTAGAGGAAATGTTCTCTTCACGG
TGGAGAACACGGATCCAGAGTGTTACTGGCTTACAAATTGGATTGAGACTATTCTTGTTCAGACCTGGTATCCAATCACA
GTGGCCACAAATTCTAGAGAGCAGAAGAAAATATTGGCCAAATATTTGTTAGAAACTTCTGGTAACTTAGATGGTCTGGA
ATACAAGTTACATGATTTTGGCTACAGAGGAGTCTCTTCCCAAGAGACTGCTGGCATAGGAGCATCTGCTCATTTGGTTA
ACTTCAAAGGAACTGATACAGTAGCAGGAATTGCTCTAATTAAAAAATATTATGGAACGAAAGATCCTGTTCCAGGCTAT
TCTGTTCCAGCAGCAGAACACAGTACCATAACAGCTTGGGGGAAAGACCATGAAAAAGATGCTTTTGAACATATTGTAAC
ACAGTTTTCATCAGTGCCTGTATCTGTGGTCAGCGATAGCTATGACATTTATAATGCGTGTGAGAAAATATGGGGTGAAG
ATCTAAGACATTTAATAGTATCGAGAAGTACAGCGGCACCACTAATAATCAGACCTGATTCTGGAAACCCTCTTGACACT
GTGTTAAAGGTTTTGGAGATTTTAGGTAAGAAGTTTCCTGTTACTGAGAACTCAAAGGGTTACAAGTTGCTGCCACCTTA
TCTTAGAGTTATTCAAGGGGATGGAGTAGATATTAATACCTTACAAGAGATTGTAGAAGGCATGAAACAAAAAATGTGGA
GTATTGAAAATATTGCCTTCGGTTCTGGTGGAGGTTTGCTACAGAAGTTAACAAGAGATCTCTTGAATTGTTCCTTCAAG
TGTAGTTATGTTGTAACTAATGGCCTTGGGATTAACGTCTTCAAGGACCCAGTTGCTGATCCCAACAAAAGGTCCAAAAA
GGGCCGATTATCTTTACATAGGACGCCAGCAGGGAATTTTGTTACACTGGAGGAAGGAAAAGGAGACCTTGAGGAATATG
GTCATGATCTTCTCCATACTGTCTTCAAGAATGGCAAGGTGACAAAAAGCTATTCATTTGATGAAATAAGAAAAAATGCA
CAGCTGAATATTGAACTGGAAGCAGCACATCATTAG
ATGAATGCTGCGGCAGAAGCCGAGTTTAACATCCTCCTGGCCACCGACTCCTACAAGGTTACTCACTATAAACAGTATCC
ACCCAACACAAGCAAAGTTTATTCCTACTTTGAATGCCGTGAAAAGAAGACAGAAAACTCCAAATTAAGGAAGGTGAAAT
ATGAGGAAACAGTATTTTATGGGTTGCAGTACATTCTTAATAAGTACTTAAAAGGTAAAGTAGTAACCAAAGAGAAAATC
CAGGAAGCCAAAGACGTCTACAAAGAACATTTCCAAGATGATGTCTTTAATGAAAAGGGATGGAACTACATTCTTGAGAA
ATATGATGGGCATCTTCCAATAGAAATAAAAGCTGTTCCTGAGGGTTTTGTCATTCCTAGAGGAAATGTTCTCTTCACGG
TGGAGAACACGGATCCAGAGTGTTACTGGCTTACAAATTGGATTGAGACTATTCTTGTTCAGACCTGGTATCCAATCACA
GTGGCCACAAATTCTAGAGAGCAGAAGAAAATATTGGCCAAATATTTGTTAGAAACTTCTGGTAACTTAGATGGTCTGGA
ATACAAGTTACATGATTTTGGCTACAGAGGAGTCTCTTCCCAAGAGACTGCTGGCATAGGAGCATCTGCTCATTTGGTTA
ACTTCAAAGGAACTGATACAGTAGCAGGAATTGCTCTAATTAAAAAATATTATGGAACGAAAGATCCTGTTCCAGGCTAT
TCTGTTCCAGCAGCAGAACACAGTACCATAACAGCTTGGGGGAAAGACCATGAAAAAGATGCTTTTGAACATATTGTAAC
ACAGTTTTCATCAGTGCCTGTATCTGTGGTCAGCGATAGCTATGACATTTATAATGCGTGTGAGAAAATATGGGGTGAAG
ATCTAAGACATTTAATAGTATCGAGAAGTACAGCGGCACCACTAATAATCAGACCTGATTCTGGAAACCCTCTTGACACT
GTGTTAAAGGTTTTGGAGATTTTAGGTAAGAAGTTTCCTGTTACTGAGAACTCAAAGGGTTACAAGTTGCTGCCACCTTA
TCTTAGAGTTATTCAAGGGGATGGAGTAGATATTAATACCTTACAAGAGATTGTAGAAGGCATGAAACAAAAAATGTGGA
GTATTGAAAATATTGCCTTCGGTTCTGGTGGAGGTTTGCTACAGAAGTTAACAAGAGATCTCTTGAATTGTTCCTTCAAG
TGTAGTTATGTTGTAACTAATGGCCTTGGGATTAACGTCTTCAAGGACCCAGTTGCTGATCCCAACAAAAGGTCCAAAAA
GGGCCGATTATCTTTACATAGGACGCCAGCAGGGAATTTTGTTACACTGGAGGAAGGAAAAGGAGACCTTGAGGAATATG
GTCATGATCTTCTCCATACTGTCTTCAAGAATGGCAAGGTGACAAAAAGCTATTCATTTGATGAAATAAGAAAAAATGCA
CAGCTGAATATTGAACTGGAAGCAGCACATCATTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 52 .25 RPM |
| SRP007412_cerebellum | 50 .46 RPM |
| SRP007412_heart | 299 .92 RPM |
| SRP007412_kidney | 121 .95 RPM |
| SRP007412_liver | 680 .64 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000016193 | ortholog_one2one | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000009226 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000105835 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000013417 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000019571 | ortholog_one2many | 1 retrogene | |
| Takifugu rubripes | ENSTRUG00000016695 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1407 | 89.52 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_1415 | 90.12 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000018270 retrocopies