Parental gene: | RAD1, ENSCJAG00000018514 |
| Aliases: | None |
| Description: | RAD1 homolog (S. pombe) [Source:HGNC Symbol;Acc:9806] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 2:168664812..168672174(+) |
>ENSCJAG00000018514
ATGCCCCTTCTGACCCAACAGATCCAAGACGATGATGATCAGTACAGCCTCGTGGCCAGCCTTGACAACGTTAGGAATCT
CTCCACTATCTTGAAAGCTATTCATTTCCGAGAACATGCCACATGTTTTGCAACTAAAAATGGAATCAAAGTAACTGTGG
AAAATGCAAAGTGTGTGCAGGCAAATGCTTTTATTCAGGCTGGAATATTTCAGGAGTTTAAAGTTCAGGAAGAATCTGTT
ACGTTTCGAATTAATTTAACTGTCCTTTTAGACTGTTTATCTATTTTTGGATCAAGTCCTATGCCAGGGACTTTAACTGC
TCTTCGGATGTGTTACCAAGGTGATGGTTACCCTTTGATGCTGTTCCTAGAAGAAGGAGGGGTGGTAACAGTCTGCAAAA
TCAATACGCAGGAACCTGAGGAGACCCTGGACTTTGACTTCTGCAGCACCAATGTTATTAATAAAATTATTCTGCAGTCA
GAGGGACTCCGTGAAGCATTTTCTGAATTGGATATGACGAGTGAAGTCTTACAGATTACGATGTCTCCTGACAAGCCTTA
TTTCAGGTTATCTACTTTTGGAAATGCAGGAAGTTCCCACCTTGACTATCCCAAAGATTCTGATTTGATGGAAGCATTTC
ATTGTAATCAGACCCAAGTCAACAGATACAAGATTTCCTTACTGAAACCCTCTACAAAGGCATTAGTCCTATCTTGTAAA
GTATCTATTCGGACAGATAACAGAGGCTTCCTTTCATTGCAGTATATGATTAGAAATGAAGACGGACAAATATGTTTTGT
AGAATATTACTGCTGCCCTGATGAAGAAGTTCCTGAATCTGAATCTTCA
ATGCCCCTTCTGACCCAACAGATCCAAGACGATGATGATCAGTACAGCCTCGTGGCCAGCCTTGACAACGTTAGGAATCT
CTCCACTATCTTGAAAGCTATTCATTTCCGAGAACATGCCACATGTTTTGCAACTAAAAATGGAATCAAAGTAACTGTGG
AAAATGCAAAGTGTGTGCAGGCAAATGCTTTTATTCAGGCTGGAATATTTCAGGAGTTTAAAGTTCAGGAAGAATCTGTT
ACGTTTCGAATTAATTTAACTGTCCTTTTAGACTGTTTATCTATTTTTGGATCAAGTCCTATGCCAGGGACTTTAACTGC
TCTTCGGATGTGTTACCAAGGTGATGGTTACCCTTTGATGCTGTTCCTAGAAGAAGGAGGGGTGGTAACAGTCTGCAAAA
TCAATACGCAGGAACCTGAGGAGACCCTGGACTTTGACTTCTGCAGCACCAATGTTATTAATAAAATTATTCTGCAGTCA
GAGGGACTCCGTGAAGCATTTTCTGAATTGGATATGACGAGTGAAGTCTTACAGATTACGATGTCTCCTGACAAGCCTTA
TTTCAGGTTATCTACTTTTGGAAATGCAGGAAGTTCCCACCTTGACTATCCCAAAGATTCTGATTTGATGGAAGCATTTC
ATTGTAATCAGACCCAAGTCAACAGATACAAGATTTCCTTACTGAAACCCTCTACAAAGGCATTAGTCCTATCTTGTAAA
GTATCTATTCGGACAGATAACAGAGGCTTCCTTTCATTGCAGTATATGATTAGAAATGAAGACGGACAAATATGTTTTGT
AGAATATTACTGCTGCCCTGATGAAGAAGTTCCTGAATCTGAATCTTCA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 3 .87 RPM |
| SRP051959_skeletal_muscle | 3 .41 RPM |
| SRP051959_lymph_node | 4 .82 RPM |
| SRP051959_lung | 3 .69 RPM |
| SRP051959_liver | 2 .10 RPM |
| SRP051959_kidney | 2 .60 RPM |
| SRP051959_heart | 2 .95 RPM |
| SRP051959_colon | 2 .68 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000113456 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000004219 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000030184 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000014437 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000014822 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000015389 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000016783 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000002894 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1004 | 83.03 | 95.05 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000018514 retrocopies