Parental gene:

RAD1, ENSPPYG00000015389

Aliases:None
Description:Cell cycle checkpoint protein RAD1 [Source:UniProtKB/Swiss-Prot;Acc:Q5R7X9]
Organism:Orangutan (Pongo abelii)
Coordinates:5:35779213..35789987(-)


>ENSPPYG00000015389
ATGCCCCTTCTGACCCAACAGATCCAAGACGAGGATGATCAGTACAGCCTTGTGGCCAGCCTTGACAACGTTAGGAATCT
CTCCACTATCTTGAAAGCTATTCATTTCCGAGAACATGCCACGTGTTTCGCAACTAAAAATGGTATCAAAGTAACAGTGG
AAAATGCAAAGTGTGTGCAAGCAAATGCTTTTATTCAGGCTGGAATATTTCAGGAGTTTAAAGTTCAGGAAGAGTCTGTT
ACTTTTCGAATTAATTTAACTGTCCTTTTAGACTGTTTATCTATTTTTGGATCAAGTCCTATGCCAGGGACTTTAACTGC
ACTTCGGATGTGTTACCAAGGTTATGGTTACCCTTTGATGCTGTTCCTGGAAGAAGGAGGAGTGGTGACAGTCTGCAAAA
TCAATACACAGGAACCTGAAGAGACCCTGGACTTTGATTTCTGCAGCACCAATGTTATTAATAAAATTATTCTGCAGTCA
GAGGGGCTCCGTGAAGCATTTTCTGAATTGGATATGACGAGTGAAGTCCTACAAATTACCATGTCTCCTGACAAGCCTTA
TTTCAGGTTATCTACTTTTGGAAATGCCGGAAGTTCCCACCTTGACTATCCCAAAGATTCTGATTTGATGGAAGCATTTC
ATTGTAATCAGACCCAAGTCAACAGATACAAGATTTCCTTACTGAAACCCTCTACAAAGGCATTAGTCCTATCTTGTAAG
GTATCTATTCGGACAGATAACAGAGGCTTCCTTTCATTACAGTATATGATTAGAAATGAAGATGGACAAATATGTTTTGT
GGAATATTACTGCTGCCCTGATGAAGAAGTTCCTGAATCTGAGTCTTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 13 .21 RPM
SRP007412_cerebellum 26 .75 RPM
SRP007412_heart 7 .04 RPM
SRP007412_kidney 8 .45 RPM
SRP007412_liver 7 .50 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000018514 ortholog_one2one 1 retrogene
retro_cjac_1004,
Homo sapiens ENSG00000113456 ortholog_one2one 1 retrogene
retro_hsap_634,
Gorilla gorilla ENSGGOG00000004219 ortholog_one2one 1 retrogene
retro_ggor_555,
Macaca mulatta ENSMMUG00000030184 ortholog_one2many 1 retrogene
retro_mmul_54,
Nomascus leucogenys ENSNLEG00000014437 ortholog_one2one 1 retrogene
retro_nleu_455,
Otolemur garnettii ENSOGAG00000014822 ortholog_one2one 2 retrogenes
retro_ogar_2296, retro_ogar_2726,
Pan troglodytes ENSPTRG00000016783 ortholog_one2one 1 retrogene
retro_ptro_462,
Tarsius syrichta ENSTSYG00000002894 ortholog_one2one 1 retrogene
retro_tsyr_738,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_564 83.18 77.66
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Download FASTA sequences of all ENSPPYG00000015389 retrocopies