Parental gene:

CCNG1, ENSCPOG00000000880

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_17:9983732..9986820(+)


>ENSCPOG00000000880
ATGATAGAAGTACTGACAACAACTGACTCCCAGAAACTGCTACACCAGCTGAACACACTGTTGGAACAGGAGGCGAGATG
TCAGCCAAAGGTCTGCGGCTTGAAACTAATTGAATCTGCACATGATAATGGCCTCAGAATGACTGCAAGACTAAGGGACT
TTGAAGTAAAAGATCTTCTTAGTCTAACTCAGTTTTTTGGCTTTGATACGGAGACATTTTCTCTAGCTGTGAATTTACTG
GACAGATTCCTGTCTAAAATGAAGGTACAGCCCAAGCACCTGGGGTGTGTTGGACTGAGCTGCTTTTATTTGGCTGTAAA
ATCAATAGAAGAGGAAAGAAATGTCCCATTGGCAACTGATTTGATACGAATAAGTCAGTACAGGTTCACGGTTTCGGACT
TGATGAGAATGGAAAAGATTGTATTGGAGAAGGTGTGTTGGAAAGTCAAAGCTACCACTGCCTTTCAGTTTCTACAACTC
TATTATTCCCTCATTCAAGAGAGCTTGCCATTTGAAAGGAAAAACAACCTAAATTTTGAAAGACTAGAAGCTCAGCTTAA
GGCATGTCACTGCAGGATCATGTTTTCTAAAGCAAAGCCTTCTGTGCTGGCTTTATCTATCATTGCACTGGAGATCCAAG
CACAGAAGTGTGTTGAGTTAACAGACGGAATAGAATGTCTTCAGAAACATTCCAAGATAAATGGCAGAGATCTGACCTTC
TGGCAAGAACTTGTATCCAAGTGTTTAACTGAATATTCATCAAACAAGTGTTCCAAACCAAATGTTGAGAAGCTGAAGTG
GATTGTTTCTGGGCGTACTGCACGGCAACTGAAACATAGCTACTACAGAATAACTCACCTTCCAACAATTCCTGAAACGG
TTCCTTAA

Library Parental gene expression (RPM)
SRP017611_brain 17 .95 RPM
SRP017611_kidney 26 .90 RPM
SRP017611_liver 21 .59 RPM
SRP040447_lung 12 .36 RPM
SRP040447_skeletal_muscle 158 .66 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000015341 ortholog_one2many 1 retrogene
retro_cjac_2319,
Dasypus novemcinctus ENSDNOG00000015166 ortholog_one2one 1 retrogene
retro_dnov_1275,
Monodelphis domestica ENSMODG00000007651 ortholog_one2one 1 retrogene
retro_mdom_1018,
Mus musculus ENSMUSG00000020326 ortholog_one2one 1 retrogene
retro_mmus_1534,
Oryctolagus cuniculus ENSOCUG00000002129 ortholog_one2many 3 retrogenes
retro_ocun_1287, retro_ocun_512, retro_ocun_615,
Pongo abelii ENSPPYG00000016016 ortholog_one2one 1 retrogene
retro_pabe_3373,
Sarcophilus harrisii ENSSHAG00000007465 ortholog_one2one 2 retrogenes
retro_shar_328, retro_shar_490,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_771 74.40 56.27
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Download FASTA sequences of all ENSCPOG00000000880 retrocopies